Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1552 |
Symbol | |
ID | 4483148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1912094 |
End bp | 1913155 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639722294 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_865467 |
Protein GI | 117924850 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATAA GCGCCACAGA ATCGCCGATC CTGATTATCG CCCCAGCCTG GGTGGGGGAT ATGGTCATGG TCAGCGCTTT AACCTGCCAT CTGCAACGGC AGTTTCCAGC CCGACCCGTG GATCTGTTGG CACCCGCCTG GACACTGCCC ATCGTGCGGC GTCTGCCCCA TGTGCGGCAT GCCTTGGAGA TGCCCTTGGG GCATGGCGCT TTTGCCCCGC GCCATCGCTG GCGTCTGGGT GTTGCATTGC GTGATCAATC TTATGGTCAG GCCATTATCC TACCCCGCGC CTGGAAGAGC GCTCTGCTCC CCTATGCCGC ACGCATTCCT CAGCGTACCG GTTTTTTGGG CGAACTGCGC TATGGCTTGC TCAATGATAT TCGCCCTCTA AACAAAGCCC TGCTACCCCG CACGGTGGAT CGTTTTATGG CGTTGGGTAC CCCGGCCCAT CAACCGTTTA CACCACCCGC CCTGCCCCAG TTGGCTTTAC GATACAGCGC CCAAGCGGGG CTCAAGGTAC TGGCCCGTTT CACCCCAGAG GCACCCCAAC AACGCCCTTG GGTGGCACTC TGTCCAGGGG CCGAGTATGG CCCGGCCAAG CAGTGGCCTG CCCACCATTT TGCCCGCACC GCGCAAGCGA TTTTGGGCGA AGGGTATGGG GTTATGCTGC TGGGTTCCCG CAAGGATGCT GCGCTTACCG CGCACATTTG CGCCCAACTG CCCCCCTCGC CTCACCTGTT GGATCTGGCC GGGCAGACCA GCTTGGATGA AGCGGTGGAT CTGCTGGCGG TGGCGCAAAC GGTCATTACC AACGATAGCG GCCTGATGCA TGTTGCCACA GCGGTTGAAC GCCATGTGAT CGCCCTGTAT GGCTCGTCGG ACCCAGGTCA CACACCCCCC CTAACCGAGC AGGCCGACCC CCTCTGGCTA GGGCTACCTT GTAGCCCCTG TTTTAAGCGG GTATGTCCTG AAGCTCACCT TAACTGCTTG CAGCAGATCA CCCCCCAGCA GGTGCTGGAG CGGTGGCAGG CCCAGCGTGA ACGCCTAAAC CATGGCCGCT AG
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Protein sequence | MSISATESPI LIIAPAWVGD MVMVSALTCH LQRQFPARPV DLLAPAWTLP IVRRLPHVRH ALEMPLGHGA FAPRHRWRLG VALRDQSYGQ AIILPRAWKS ALLPYAARIP QRTGFLGELR YGLLNDIRPL NKALLPRTVD RFMALGTPAH QPFTPPALPQ LALRYSAQAG LKVLARFTPE APQQRPWVAL CPGAEYGPAK QWPAHHFART AQAILGEGYG VMLLGSRKDA ALTAHICAQL PPSPHLLDLA GQTSLDEAVD LLAVAQTVIT NDSGLMHVAT AVERHVIALY GSSDPGHTPP LTEQADPLWL GLPCSPCFKR VCPEAHLNCL QQITPQQVLE RWQAQRERLN HGR
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