| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1550 |
|---|
| Symbol | |
|---|
| ID | 4483146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1910060 |
|---|
| End bp | 1911133 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639722292 |
|---|
| Product | lipopolysaccharide heptosyltransferase I |
|---|
| Protein accession | YP_865465 |
|---|
| Protein GI | 117924848 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCC TGCTGCTGGT TAAATTCTCC TCCATGGGCG ATTTAATCCA CATGCTGCCC
GCCGTTACAG ACAGCCTACG GGCCATCCCC CACCTTCAGT TGGATTGGTT GGTGGAGGAG
GCTTTTCAGG CCATTCCAAG CTGGCACCCT GGGGTTGGAC AGCGCCATAT CATAGGGCTC
CGGCGCTGGA AAAAGGCGTT TTTTGCCAGG GAAAACCGCC AGCAGATGGC ACACTTTATC
GCCTCGGTAC GGCAGACCCC CTATGATTGT GTAATCGACG CGCAAGGCTT GATGAAAAGC
GCTTTGACCG CACGGTTGTG CGCACCGGGC ACGCCCCTAC ACGGCCCTTC CAAACAGTGG
GCCAGGGAGC CCCTCGCCTG CCACCTCTAC CACCATCGCC ATGGTGTGGC AAAACCGGGA
CATGTGATCA CTCAACTGCG TCAATTGATG GCCGCGTCCC TGGGCTACAG CATGCCCACC
ACCCCGGCGG ATTTTGGGAT TGAGCGCAGC CGCTTGCCCG CCTGCCCCCC CTGGTGGCAG
GATCATGAGG GGGCACAAGC CACCACACCT TATCTGATTT TTTTACATGG CGCCGGTTGG
AGCAGCAAAG CATGGCCCGA GCCCTATTGG GTCGAACTGG CCCGCCAGAT GGGCCAACAA
CACCCCCTGC CCATCCTCTT ACCCTGGGGT TCTGTCGAGG AGTTTAACCG CGCCCAGCGC
ATCGCCGCCC AGGCCCCCAT GTGTCAGGTA CTGCCCCAAC TCAGCATGGC CCAGGTGGCC
GCCTTGATTG CCGATGCCGC CGCCGTGGTG GGGTTGGATT CGGGCTTTGC CCATTTAGCC
GCCGCCCTCA ACACCCCCCA CATCACCCTT TATGGGGCCA CCAATCCCGA CTACTCCGGG
GTTGCCGCGC AGCGCGGTGC GCTGCTACGC TCCAGCCGGG CCTGCGCCCC ATGCATGCAG
CGGCGCTGCC CCCTGTCGCT TGAAGAGCAA GGGGCGCTCG CCCCGCCCTG CTTTACGTCG
CTGCCCCCCG CCCACATCGC TACCGCCCTA ACCCAACTGC TGGAGCGCCA TTGA
|
|---|
| Protein sequence | MSRLLLVKFS SMGDLIHMLP AVTDSLRAIP HLQLDWLVEE AFQAIPSWHP GVGQRHIIGL
RRWKKAFFAR ENRQQMAHFI ASVRQTPYDC VIDAQGLMKS ALTARLCAPG TPLHGPSKQW
AREPLACHLY HHRHGVAKPG HVITQLRQLM AASLGYSMPT TPADFGIERS RLPACPPWWQ
DHEGAQATTP YLIFLHGAGW SSKAWPEPYW VELARQMGQQ HPLPILLPWG SVEEFNRAQR
IAAQAPMCQV LPQLSMAQVA ALIADAAAVV GLDSGFAHLA AALNTPHITL YGATNPDYSG
VAAQRGALLR SSRACAPCMQ RRCPLSLEEQ GALAPPCFTS LPPAHIATAL TQLLERH
|
|---|
| |