| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1548 |
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| Symbol | |
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| ID | 4483144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1907328 |
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| End bp | 1908725 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639722290 |
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| Product | peptidase M20 |
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| Protein accession | YP_865463 |
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| Protein GI | 117924846 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGGTT TTGCGCAACG GCCCCCCCTG CCGGATGCCC ACAAACGCCA AGATTATCTG
GCGCGTTTGA TCGAATATCT TAAAATACCC TCCATCTCAG CAGATCCAGC CTATGCCGCC
GATCTAGACC GGTGTGCCAA CTACACCGCT GATTTGCTGC GCTGGGCCGG TATGCCAGAG
GTCGAGCTAC TGCCCATTGT GGGGGCCCCC GCCTATGTGG TGGCACGGCG CATGGTTAAC
CCCCAAGCGC CTACCCTGCT GATCTATGGC CACTATGATG TGCAACCTGA AATCCCTGTA
GAGCGATGGA CCACCCCCCC CTTCACGCCG CATGTGCGCC AAGATCGGCT GTTTGCGCGG
GGGGCCACCG ACGATAAAGG GCAGGTGATG ATGCACATCG CCGCCATCGC CCAACTGTTG
CAGCAGGGGG GCGAGATCCC CTACAACCTG ATCTTTTTGG TGGAGGGTGA AGAGGAGATC
GGTAGCCCCC ATCTGCAACA GTTTCTCGCC AGTTATGGGG CGTCGTTGCC GTGCGATCTG
CTGCTGCTCT CCGATACAGC CATGTGGGAT ATTGGCAAGC CTGCCATTAC CACCAGCATT
CGGGGTATGG CGCTTATGGA GCTCACCCTC AGCAGTGCCA GCCGCGATCT GCACTCAGGT
ACCTATGGCG GGGCGGTTGC CAACCCCTTA GAGATGCTCA GCCGCTTGCT CACCACCCTT
AAAGATGACG AGGGGCGCAT TTTGGTCGAG GGCTTTCATG ACGGTGTGCT GCCCATTAGC
CCCGCCATGT CTGACGAGTT GCAAGCCATC CCTTTTAACG AAACAGTATG GCGGCAGGGC
ATTGGCCTTT CACAAAGCTG GGGCGATCCC GATTATGCAC TGCTGGAGCG GCTGTGGATG
CGCCCTACGC TAGAAATAAA TGGTCTCTGG GGGGGGTATT GCGGGCAGGG TATGAAAACG
GTGCTACCCG CCCAAGCCCA CGCCAAACTT TCCATGCGCT TGGTGCCTAA TCAAGATCCC
GCCCATGTGA GCCGGGTGGT CGAGCAGCAT CTTTACAAAC ATCTGCCCCC TCACGCCCAT
TTGCAGATTG AGCATGCGCC CGGCTCAGGT TTTGGTTTGC GGGTGGATGG CGCACACCCC
CTTTTACACG CCGTGCGGCG TGGCTTGGAA GAGGCCTTTG GTGAAGCCCC TCTCTTGATC
GGTGAGGGGG CGACCATCCC CGCTGTGGCC GCCTTGAAAG AGCGCTTAGG CGCGATGCCC
ATCCTCATCG GCTTCGCGTT GCCCGATGCA AAATGTCACG CACCGGATGA AAATATTCAC
TTGCCCACTT TTTATGCAGG AATTGAGGCT TTAATACGCA TCTATAGTTA TTATAGTGCA
GATTTGATGC AAGAGTAG
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| Protein sequence | MSGFAQRPPL PDAHKRQDYL ARLIEYLKIP SISADPAYAA DLDRCANYTA DLLRWAGMPE
VELLPIVGAP AYVVARRMVN PQAPTLLIYG HYDVQPEIPV ERWTTPPFTP HVRQDRLFAR
GATDDKGQVM MHIAAIAQLL QQGGEIPYNL IFLVEGEEEI GSPHLQQFLA SYGASLPCDL
LLLSDTAMWD IGKPAITTSI RGMALMELTL SSASRDLHSG TYGGAVANPL EMLSRLLTTL
KDDEGRILVE GFHDGVLPIS PAMSDELQAI PFNETVWRQG IGLSQSWGDP DYALLERLWM
RPTLEINGLW GGYCGQGMKT VLPAQAHAKL SMRLVPNQDP AHVSRVVEQH LYKHLPPHAH
LQIEHAPGSG FGLRVDGAHP LLHAVRRGLE EAFGEAPLLI GEGATIPAVA ALKERLGAMP
ILIGFALPDA KCHAPDENIH LPTFYAGIEA LIRIYSYYSA DLMQE
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