| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1545 |
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| Symbol | |
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| ID | 4483141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1903130 |
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| End bp | 1904965 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722287 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_865460 |
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| Protein GI | 117924843 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGG ACGTTTACCC CATCGAAAAA CTGCGTAATA TTGCCATTAT TGCCCACGTG
GACCATGGCA AAACCACCTT GGTGGATAAG CTGTTGCAGC AGTCTGGCAC CCTCAAACAG
CGCGGAGAGG CGACAGAACG GGTGATGGAC TCCAATGACC TGGAAAAAGA GCGCGGCATC
ACCATTTTAG CAAAAAATAC GGCCATTTAT TGGAACGGCT ATCGTATTAA CATTGTGGAC
ACCCCCGGAC ACGCCGATTT TGGCGGTGAG GTTGAGCGGG TACTCTCCAT GGTGGATTCG
GTGCTGCTGT TGGTGGATGC GGTAGAAGGC CCCATGCCTC AAACCCGGTT TGTCACGCAA
AAGGCGTTTG CTCAAGGGTT GCGCCCCATT GTGGTGGTCA ACAAAATCGA CCGTGATGGG
GCCCGCCCCG ATTGGGTGCA AGATCAAACC TTTGATCTGT TTGATAAACT GGATGCCACC
GACGAACAGT TGGATTTTCC GATTATCTAC ACCTCGGCCC TGCGCGGCTT TGCCACCCTG
GACCACACCC AAGTGACCAC CAACATGGAT GCCCTGTTTG AGACCATTAT CAAGCATGTC
TCTCCACCGG ATGTGGACCA AGAAGGCCCC TTCCGTATGC AGGTTACAGC GCTGGATTAT
AACAGCTACG TGGGCATCAT TGGGATTGGT CGTATTGCCC GTGGTCGCAT TAAGAGCAAT
AGCCCGGTGG TGCTCGTTGA CGCCGACGGC AGCCAACGTA ATGGCCGCAT GTTGCAACTG
TTCGGCTTTT TGGGGCTGGA TAAGGTGGAA GTGCCCGATG CCAAAGCTGG CGATATTATC
GCCTTCACCG GCATTGAAAA GTTGCGTATC TCCGAGACCA TCTGCCACCC CGATGCGGTG
GAGCCTCTGC CCCTATTGTC GGTGGACGAG CCCACGGTTA GCATGACCTT TCAGGTCAAC
GATTCACCCT TGGCTGGCCG TGAGGGTAAA TTTGTTACCA GCCGCCAACT GCGGGACCGT
TTGATGCGCG AGTTGGAGAC CAACGTAGCC CTACGGGTCG AAGAGTTGGA TGATCCCGAT
AAATTTCGGG TCTCGGGCCG TGGTGAACTG CACTTGGGAA TTCTCATTGA GAACATGCGT
CGCGAAGGTT ACGAGTTAGG GGTCTCCCGT CCTGAGGTCA TCGTCAAAGA GATTGATGGT
GAAAGACGCG AACCCTATGA ACAGCTGACC GTCGATATTG ACGAAACCAG CCAGGGCAAG
GTGATGGAAG CCCTTGGTGA GCGTAAGGGT GAGTTGGTCA ACATGGTGCC CGATGGCCGT
GGCCGCGTGC GCTTGGACTA TATGATCCCC GCGCGGGGTT TAATCGGTTT TCTGACGGAA
TTCCGCACCA TGACCTCTGG TACTGGTTTG ATGTACCACG TGTTTGACCA TTTTGGCCCC
TATATCAAGG AGCCTATTGG GCAGCGCATC AACGGTGTGT TGATTGCCAA AGACCTAGGG
GAGACCGTAG CCTTTGCTCT GTTCAACTTA CAGGAGCGTG GCCGTCTGTT CTCCTCACCG
GGGGATAAAT GCTATGAAGG CATGCTGATC GGCATTCACA GCCGTGGCCA GGATCTGGTG
GTGAACCCCA TGCGGGCTAA GCAACTGACC AACATTCGCG CCGCTGGTTG TGACGAAAAC
ATCAATCTGG TGCCGCCCAT TCGCTTTAAC CTGGAAGAGG CGTTGGAATT CATTGATGAC
GACGAGTTGG TTGAAGTAAC GCCCAAAAGC ATCCGTCTAC GTAAGCGGTT TTTAAAAGAG
CATGAGCGTA AGCGCTCGTC TAAAAAGGCT CAATAA
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| Protein sequence | MSQDVYPIEK LRNIAIIAHV DHGKTTLVDK LLQQSGTLKQ RGEATERVMD SNDLEKERGI
TILAKNTAIY WNGYRINIVD TPGHADFGGE VERVLSMVDS VLLLVDAVEG PMPQTRFVTQ
KAFAQGLRPI VVVNKIDRDG ARPDWVQDQT FDLFDKLDAT DEQLDFPIIY TSALRGFATL
DHTQVTTNMD ALFETIIKHV SPPDVDQEGP FRMQVTALDY NSYVGIIGIG RIARGRIKSN
SPVVLVDADG SQRNGRMLQL FGFLGLDKVE VPDAKAGDII AFTGIEKLRI SETICHPDAV
EPLPLLSVDE PTVSMTFQVN DSPLAGREGK FVTSRQLRDR LMRELETNVA LRVEELDDPD
KFRVSGRGEL HLGILIENMR REGYELGVSR PEVIVKEIDG ERREPYEQLT VDIDETSQGK
VMEALGERKG ELVNMVPDGR GRVRLDYMIP ARGLIGFLTE FRTMTSGTGL MYHVFDHFGP
YIKEPIGQRI NGVLIAKDLG ETVAFALFNL QERGRLFSSP GDKCYEGMLI GIHSRGQDLV
VNPMRAKQLT NIRAAGCDEN INLVPPIRFN LEEALEFIDD DELVEVTPKS IRLRKRFLKE
HERKRSSKKA Q
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