| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1532 |
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| Symbol | |
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| ID | 4482857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1881670 |
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| End bp | 1883910 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639722274 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_865447 |
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| Protein GI | 117924830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00292625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAT ATACCCGTAA GATGGTTTTT TTGCGCTGGC GATTAGCCCT TTGTCAAAAC
GGTGACAAAA GGCTGATTGC GTTGGGCTTG GTGCGTGCAG GGGTGGGGCT GGTGTTTTCC
CTGCTGGTGC TGTTGCCCCA TGGCTTGAAT GCGGCCCCTT TGGTTGATTT GGGTGACGCG
CAACTGTTGG CAGGTAAACA TGCTGGTTCA GGTAAAACTG GTCCTGTCCC GCAGTATGAG
CAAGCATTGC AGGGTACCCC CCAGCAACGG GCAGCGGCCT TGATGCGGTT GGGACATCTT
AGTTGGATTG CGGATGGTGA CGGGGGTCAT GTTGAAAAAG CGATTGACTA TTGGCAGCAG
GCGTACGCTC TGGGGCGTTG GGATGCGGCC TATTTAATCG GTAAACATTT TCAACATCTA
CCCAACCAAA AAGGTGCAAA CATACCGCTG GCACGCCTGT GGTATCAACG GGCCGCGCTG
GGGGGGCATG GCTTGGCGAT GTATGGTTTA TGGCAGTTGG ACAGGGATCA GCACGGAGGG
ATGGGGGCAG AAGCCAAACA GTGGTTAATT CGTAGTGGTG AGGCTGGAGA GCCGTTGGCC
ATCAGCCGTC TGGCTGCCAT GGCCAAAATG TCGTTTGATG GCAAGATGGG GGGCAAGCGT
GCTGTGGAGT GGTTGAATGT GGGCTCCGCC TTGGGGGATC CCTTGGCACG CATGGCGCTG
GTTGCCGAAC CCACCACTAC CGGTGTTCCT GATCAAGCGC AACTTGCCGC CTGGGCCGAT
GAAGCCGTCC GTTTGGGTGA GTGGCAGGCC CAGGAATTAC GTGCCAAATT ATTGGAAAAA
CGGACCACCG CCACATCGCC GATGGTAAGT GCCCCGCAAA TAACCCAAGC GCCGAGATCG
GCTGGTCAAC CCCAGGTTGA ACAGAAACAG GTCATCCACG CAGCGCCTAA GCCGGTGCCA
GATGCTGAGC AAAAAGAGCT TGAAAAAGCA CAATTAAACC TAGAGCATGA GGAAAAACAA
AAGGTTCGTT CAGACGCCGC TTCGGTCTCT ACACCGCCAA GTGGCGTTGC CGTGCAGGAT
TCATCTTCCC CCCAAACTGT GGATGAGGTC CAACTGGATG CAAAGGCAGG TTTTGGCTCC
AGCACGGCGG AGCGCTTGGA GCCAGCCGAG CCCATGGAGG ACCGTAGCGC CGTGCTGGTG
GCCCAGCAAC CCCCGGCACA GGATGAAACG ACCACAACCG CTCGGCCAGA GCCGGAAGCT
CGTCATGCCT ATCCGTCGAG GGCTGTACCC GAGCCTTCAC CGAAATCCCA GCTAAAGAGA
GCCGCAGAGC AGAGTGCTCC GCTTGAGCAA GCCCCAGGGC GCGAAGCTGT GCCAATGGCG
CATGTCAAAG AGGATATCGC TAAAAGTGTC GTGGCCCCAC TGCAACGGCC TGCCGCGAAG
GGTAGCGTAG ATGAGAAGCG TGGGATCTTG CCTGCAAACC AGCTGGGTGG GGAGGGCGCG
CCGACGCCAA CAGAGCGACA GCCGAAAACC GTGGATGGTA AGCGCTATGA CACGCTTACT
TGGCCCCAAT TGATGCGATT AGCGCGGCGG GGAGATGCGG AGGCCCAGTA TCGTATGGGT
CAGTCTTTGC GCGACGAAAC CGCATTGGGA AATGGTTTGG ACGACGGTTT TAAGTGGCTT
AAAAAGGCCG CTGATCAGGG GCACGTGCAA GCGCAGAATA GTCTGGGTTA TATGTATTCG
CAGGGGATTG GCACGCGGGT TGATTTTTTA AAGGCACTCA AGTGGTATGG TGAGGCTGCG
AAACACGGGG ATGCCTTGGC CCAGTTTAAT GTGGGACATA TGCACTATCG TGGCAAAGGG
GTGCAGGCTA ATCCAGGTAG CGCCTATGGT TGGTATGTGC GTTCGGCCAA ACAGGGGTTT
GCTCCGGCAC AAACAGCGGT TGGCTATCTG CTGGAAAATG GCTTGGGGGT GGATAAAAAT
TTGGCCGAGG CCCTCAACTG GTATACTCAG GCGGCGCGTC AGAACTATGG TGCGGCGCAT
AATGCCATTG GGCGGTTTTT GCTTGGTCAT AGTGATGGTG GGGGTGATAC TCAACGACGC
GCCATTATGC ACTTTCGGCT AGGGGCATGG GCTGGGGATG AGATATCGCG GATCAATTAT
GAGTCATCCA CAAAAGCCAT GAATGCAACG CAGCAAGCAC GAATTGACGC ATTGGCTAAA
ACATGGTTAG AACAACCGTG A
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| Protein sequence | MEKYTRKMVF LRWRLALCQN GDKRLIALGL VRAGVGLVFS LLVLLPHGLN AAPLVDLGDA
QLLAGKHAGS GKTGPVPQYE QALQGTPQQR AAALMRLGHL SWIADGDGGH VEKAIDYWQQ
AYALGRWDAA YLIGKHFQHL PNQKGANIPL ARLWYQRAAL GGHGLAMYGL WQLDRDQHGG
MGAEAKQWLI RSGEAGEPLA ISRLAAMAKM SFDGKMGGKR AVEWLNVGSA LGDPLARMAL
VAEPTTTGVP DQAQLAAWAD EAVRLGEWQA QELRAKLLEK RTTATSPMVS APQITQAPRS
AGQPQVEQKQ VIHAAPKPVP DAEQKELEKA QLNLEHEEKQ KVRSDAASVS TPPSGVAVQD
SSSPQTVDEV QLDAKAGFGS STAERLEPAE PMEDRSAVLV AQQPPAQDET TTTARPEPEA
RHAYPSRAVP EPSPKSQLKR AAEQSAPLEQ APGREAVPMA HVKEDIAKSV VAPLQRPAAK
GSVDEKRGIL PANQLGGEGA PTPTERQPKT VDGKRYDTLT WPQLMRLARR GDAEAQYRMG
QSLRDETALG NGLDDGFKWL KKAADQGHVQ AQNSLGYMYS QGIGTRVDFL KALKWYGEAA
KHGDALAQFN VGHMHYRGKG VQANPGSAYG WYVRSAKQGF APAQTAVGYL LENGLGVDKN
LAEALNWYTQ AARQNYGAAH NAIGRFLLGH SDGGGDTQRR AIMHFRLGAW AGDEISRINY
ESSTKAMNAT QQARIDALAK TWLEQP
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