| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1514 |
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| Symbol | |
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| ID | 4482561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1849067 |
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| End bp | 1853461 |
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| Gene Length | 4395 bp |
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| Protein Length | 1464 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722256 |
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| Product | putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme |
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| Protein accession | YP_865429 |
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| Protein GI | 117924812 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases
[COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase
[TIGR02100] glycogen debranching enzyme GlgX |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.117562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.556808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGAT CTTCTATCCG GGTGTGGCCC GGGAATCCGT TTCCTCTAGG TGCAACGTGG
GATGGCCGTG GGGTCAATTT TGCCATCTTT TCTGAGCATG CCGAGCGGGT GGAACTCTGC
CTGTTTGGTC CCGATGGCTT TCGTGAAACG GCACGCATCT CCCTCTCGGA GTATACCAAC
CAAGTGTGGC ACGGCTACCT GCCGGATGTG CGTCCTGGGC AGCTCTATGG GTATCGGGTT
TATGGCCCTT ATCAGCCGGA ACATGGCCAC CGTTTTAACC ATAATAAACT GCTGTTGGAT
CCTTACGCCA AATTGCTTAA CGGACAGTTG CAGTGGCATG AAGCGCTGTT TGGTTATCGT
TATGATGATC CCTTGGGGGA TCTAAGCTTT AGTGATCTGG ATAGCGCCCC CTATGTGCCC
AAATGCGTGG TGGTGGATAC CGCCTTTACC TGGGGTGGTG AGCAACCCCC CAATGTGAAT
TGGCTGGATT CGATTATCTA CGAGATGCAC GTACGTGGTT TTACCATGCA ACACCCCAAG
GTGCCGCAAA ACCAGCGGGG GACCTTTGCC GGCCTGTGTG CGCCAGAGGT GATTAGCTAT
CTGCAAGATT TGGGGATCTC TTCGGTGGAG TTGCTGCCGG TGCATGCCTC GGTGGATGAG
TGGCATCTGG CGCAAAAAGG GCTTTCAAAC TATTGGGGTT ATAATACGTT GGCCTTTTTT
GTGGCCAATC CTCGGTTTGC CAGCGGGCCA GACGCCATCC GCGAATTTAA AACCATGGTG
CAGGTGTTCC ATGAGGCGGG TATCGAGGTG CTGTTGGATG TGGTCTACAA CCACACCGCA
GAGGGCAACC ATGAAGGGCC AACTCTGAGC TTTAAGGGCA TTGATAATAA AGCCTATTAT
AAATTAGAGC CGGGCTATAA CCGTTACTAT CGCGATTTTA CCGGTTGCGG CAACTCGTTT
AATCTGCGTC ATCCCAAGGT ATTGCAGTTG GTGATGGACT CGCTGCGCTA CTGGGCAGGC
GAGATGCATG TGGACGGTTT CCGGTTTGAC TTGACCACCA CCTTGGCGCG GGAGGCCGAT
GGCCACTTTG ACCGCCACTC CGGTTTTCTG GATGCCATTG CCCAGGATCC GCTGTTGTCA
CGCAAAAAGA TGATTGCCGA GGCGTGGGAT ATTGGTGATG GGGGGTATCA GGTAGGGAAC
TTTCCCCCAG GCTGGGGCGA GTGGAACGAC CGCTACCGCG ATGCCATACG CCGGTATTGG
AAAGGGGATA AGGGCATGGC AGGGGAGTTG GCTTCACGGT TGACGGGCTC CAGCGATATC
TTTAACCACA ATGGTCGGCG GCCTTGGTCC AGCATCAATT TTGTCACCGC CCACGACGGG
TTTACCCTGC GCGATTTGGT CTCCTATAAC CATAAGCACA ACAGCGATAA TCTGGAAGAT
AACCGGGATG GCCGTGATGC CAATGATAGC TGGAATTGTG GTGTAGAGGG GGCCTCCGAG
GAGCCCGCCA TACGGATTTT GCGCCTGCGT CAAATGCGTA ATTTTTTGAC CAGTTTGCTG
CTCTCGCAAG GTTTGCCCAT GTTGGTGGCG GGGGATGAGC GCGGGCGCAG TCAGAACGGC
AATAACAATC CTTACTGCCA GGACAATGAT ATTAGCTGGG TCAATTGGGA TGAGCACGAT
GAAGAGGCCA AAGAGCTGCT CTCTTTTACC CGTTTTCTGA TTAAATTGCG TCGTGAGCAT
GGGGTTTTTC ACCGTCATAG CTTTTTTAAT GGTCAAAAAA TCACCGGTCT TGAGGTTAAA
GATGTGGTGT GGTTGCGCCC CGATGGCCGG GAGATGGAGC GGTGTGATTG GGATAATGTG
CACACCCTCT GTTTGGGCAT GCTGCTGTCG GGTGAGGCGG GGGAAAAATT TCTCTCCCGC
TACGGGGATG CGCAGGTGGA TGATACCTTT CTGCTGCTGC TTAATAGCCA CCATGAGCCG
CTACCGTTCC ATCTACCAGA GGTTGAGGAT GGCAGCGGTT GGACCCGGCT GTTGGATACC
ATGGAGAGGG GTGGCGGTTG TGATGAGCCA CAGCCAGGCA TTGTCAACAG CTATCAAATG
GGTGGGCGCA GTGCGGTGCT GTTTGTCTTG CAACGCCGTG AGCGGGCGGT GGAGGTTAAA
CCCAAGCCCG CTACCAGCGG GGATGAGCAT GAACTGCTCA GGCAGTTGGC CGAGGCTGCC
GGTATTGATA GAGGTTACTG GACCGTCTTT GGAGAGTGGT TTGACCTGCC GGATGCCTCG
TTAAGGAGCT TTTTGGGGGC GATGGATCTG GCTGCGGACA ATCAAGGGCA GATCCGGGCC
AGCCTGACTC GCTTAGAAGA GGAGCCTTGG CGACGCGCTA TGCCACCGGT GGTGATGTGC
CGTTATCCTT GCACAGGGGT GGATATCGCC ATTGTGGTGG GCGCCGAGAT GGTGGATGAG
GCGTTGGAGT GGGTGTTGGT GGATGAAGCG GGGCATATCA TTCCTGGCAA AGTGGTGCCC
AGTGATATGC CGTTGGATGG TGAGCGCTTG GTGGATGGGC AGCATCTGGA GCGGCGTATA
TTCCATCTCT ATCAAAAGCT TGAGGTTGGC TATTATCGGT TTGAATTGCA TGGGGCGGGT
CTGCCCGATG GCGATTTTGC CAGCATGCGC TTGGTGGTGG CTCCGTCGCG CTGTTATCTA
CCCAAAGCGT TGGAGAAAAA TGATGGGCGC ATCTGGGGCT TTAGTCCCCA ACTCTATGCA
CTGCGCTCTC AGCGTAACTG GGGCATTGGT GATTTTGAGG ATCTCAAGCA GTTGGTGGAG
ATAACCGCCA GTCATGGGGG CGGGATTATT GGTTTGAACC CGCTGCACAC CCTGTTTTTG
ACCCGACCGG AGCAGGTTAG TCCTTATTCG CCCAACAGTC GGCACTATGT TAATCCACTC
TATATTGCAC CCGAGCAGGT GCCGGAAATG GAGTCGTGTG AAGAGGCCCA GATCCGCCTT
AACTCGCCTG GGGTGCGGCG CCTGCTGAAC AAGTTACGTG AGTCGGAGAT GGTGGATTAT
GTCGAGGTGT CGGCATTGAA GCTCTCGATC ATGCGGCTGC TTTATGGGGT GTTTCGTGAT
AAGCATATGA CCCCGGATAA GAGCTGTGTA ACCAGCCCCC GGGGTTTGCA GTTCAGAGCC
TTTGTCAAGG CGGGGGGTGA CGCCCTTATG CGGTTGGCGG TGTTTAACGC ATTATCGGTC
CAGTTCGCCC AAACCGGCGA GGATGTCGGA GGCTGGCGCT CCTGGCCCAC CCCCTACCGC
CGTCCGGATT CCCCCGAGGT CAGGCGTTTT ATGCAAGAGC AAGAGGAGGA GGTGTTTTTC
TACCTCTACC TCTACTGGAT TGCTGACACC CAGTTACAAG AGGCCAAAGC GAGCGCACAA
CAGCAGGGCA TGCCGGTAGG TCTCTACGCC GATATGGCGC TGGGGGTTGA CCCGGATGGG
GCCGATTTCT GGAATGAACA GAGCGCCTAT GCGGGGGATA TGCGCATCGG TGCGCCAGCG
GATCTGTTTA ATCCCAAGGG GCAAAACTGG GGGCTGCCAC CCTTTGACCC CCGTGCGTTG
CGTGCGCAGG GCTATCAACC CTTTATTGAT GCCCTGCGTA ATACCATGCG CCACGCGGGG
GCCATTCGTC TGGATCATGT GATGAGTCTG GCCAGACTAT TTTGGGTACC GGTGGGGGCT
CCGGCCACAG AGGGTGGTTA TGTGCGCTAT CCGGTAGAGG ATCTGCTAGG GTTGGTAGCC
TTAGAGAGCC AGCGCAACCA ATGTACGGTG ATTGGTGAGG CGCTGGGTAC GGTACCTGAA
GGGTTCCGGG AAAAGTTGGC TGAAAATGGT ATTCTCTCCT ACCGTTTGCT CTATTTTGAA
CGGGCTGAGG AGGGGCGTTT TCTACAGCCG CACGAATTTA ATACCCGCTC GTTGGTTGCG
GCGACCACCC ATGATTTGCC AACCTTTAGC GGTTTTTGGG AAGGGGTGGA TCTGGCGGTT
AAAGAACAGC TGGATCTCTA CCCCAATGAG GAAATGGCTG TGCGATTCCG TGGTGAGCGG
GTGCATGATA AAATGAAGTT AAGGGAGGCG TTGCAGCAGG TGGGCATTCC CCTGACCGAG
CAGTTTGAAC AGGCCGATGC CACCCCCGAG TTGATCGAAG CGGTCTACCG TATGTTGGCC
CGTACCCCAG CGCATTTGCT CATGGTACAG CTGGAGGATG TGTTGCAGCA AAAAGAGCAG
GTTAACCTGC CTGGAACCGT TAATGAGCAC CCCAATTGGC GCCGTAAATT GCCTGCGGAT
CTGGAAGCGT TGGTGCAAGA TCCACGCTTT AAGGGCTTGA CTAAAATGTT AAATAGCGAA
CGCCCACCCC TATAA
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| Protein sequence | MSRSSIRVWP GNPFPLGATW DGRGVNFAIF SEHAERVELC LFGPDGFRET ARISLSEYTN
QVWHGYLPDV RPGQLYGYRV YGPYQPEHGH RFNHNKLLLD PYAKLLNGQL QWHEALFGYR
YDDPLGDLSF SDLDSAPYVP KCVVVDTAFT WGGEQPPNVN WLDSIIYEMH VRGFTMQHPK
VPQNQRGTFA GLCAPEVISY LQDLGISSVE LLPVHASVDE WHLAQKGLSN YWGYNTLAFF
VANPRFASGP DAIREFKTMV QVFHEAGIEV LLDVVYNHTA EGNHEGPTLS FKGIDNKAYY
KLEPGYNRYY RDFTGCGNSF NLRHPKVLQL VMDSLRYWAG EMHVDGFRFD LTTTLAREAD
GHFDRHSGFL DAIAQDPLLS RKKMIAEAWD IGDGGYQVGN FPPGWGEWND RYRDAIRRYW
KGDKGMAGEL ASRLTGSSDI FNHNGRRPWS SINFVTAHDG FTLRDLVSYN HKHNSDNLED
NRDGRDANDS WNCGVEGASE EPAIRILRLR QMRNFLTSLL LSQGLPMLVA GDERGRSQNG
NNNPYCQDND ISWVNWDEHD EEAKELLSFT RFLIKLRREH GVFHRHSFFN GQKITGLEVK
DVVWLRPDGR EMERCDWDNV HTLCLGMLLS GEAGEKFLSR YGDAQVDDTF LLLLNSHHEP
LPFHLPEVED GSGWTRLLDT MERGGGCDEP QPGIVNSYQM GGRSAVLFVL QRRERAVEVK
PKPATSGDEH ELLRQLAEAA GIDRGYWTVF GEWFDLPDAS LRSFLGAMDL AADNQGQIRA
SLTRLEEEPW RRAMPPVVMC RYPCTGVDIA IVVGAEMVDE ALEWVLVDEA GHIIPGKVVP
SDMPLDGERL VDGQHLERRI FHLYQKLEVG YYRFELHGAG LPDGDFASMR LVVAPSRCYL
PKALEKNDGR IWGFSPQLYA LRSQRNWGIG DFEDLKQLVE ITASHGGGII GLNPLHTLFL
TRPEQVSPYS PNSRHYVNPL YIAPEQVPEM ESCEEAQIRL NSPGVRRLLN KLRESEMVDY
VEVSALKLSI MRLLYGVFRD KHMTPDKSCV TSPRGLQFRA FVKAGGDALM RLAVFNALSV
QFAQTGEDVG GWRSWPTPYR RPDSPEVRRF MQEQEEEVFF YLYLYWIADT QLQEAKASAQ
QQGMPVGLYA DMALGVDPDG ADFWNEQSAY AGDMRIGAPA DLFNPKGQNW GLPPFDPRAL
RAQGYQPFID ALRNTMRHAG AIRLDHVMSL ARLFWVPVGA PATEGGYVRY PVEDLLGLVA
LESQRNQCTV IGEALGTVPE GFREKLAENG ILSYRLLYFE RAEEGRFLQP HEFNTRSLVA
ATTHDLPTFS GFWEGVDLAV KEQLDLYPNE EMAVRFRGER VHDKMKLREA LQQVGIPLTE
QFEQADATPE LIEAVYRMLA RTPAHLLMVQ LEDVLQQKEQ VNLPGTVNEH PNWRRKLPAD
LEALVQDPRF KGLTKMLNSE RPPL
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