| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1509 |
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| Symbol | |
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| ID | 4482556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1841340 |
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| End bp | 1843055 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722251 |
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| Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_865424 |
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| Protein GI | 117924807 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.44121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0349148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATATTG CCATTGTTGA TGACTCTCCA GATGATCGTT TGCTCTTGAT GCGTATCCTT
AGCAAAGCGG GTTATAGCAC ATTACAGCTG CACGACTCTG GCGAAGCCTT TTTACAAACC
TTGGGGTTAA CACCAACGGA TACAGCGAGC ATTGCGCCGT TTAACCCCCC CCATACCAGC
CTGCCAGACA TCATTTTTAT GGATGTTATG ATGCCGGATA TGGATGGCTT ATCGGTGCTA
CGGCAGCTCA AAGCCAACCC GCCCACCCAG AATATTCCGG TCATTATGGT CACGGGCAAT
GATCGCCCGC GTGATCTGGC CCACGCCTTT GAAGAGGGGG CCACCGACTA TATTACCAAG
CCGATTCGCC GGGTTGAACT GCTGGCACGT CTGCGTTCCA TCATTAAGTT AGAGCGGGCC
ATGCAGCAGG TACGCAGCAG TGAAAAACGG CTTAGAGATC TTACGGCTTC GTTGGGAGAA
GGTTTGTTGA GCGTGGATAA TGCCCAGCGC ATCATCTTTC TTAACCCCGC TGGGGAAAAG
TTGCTGGAAT ATAGCGAGTC TGCCCTCCAC CTAACCACAT TAAACGAGCA ATTGATTCCC
CACACTTGTG GCAGTTTGCA CGACCAGCAG AGCGCCGATC ACATGCTGGC CGCCCTGCGT
GGTGAAACCG AACAGATCAG TGGCGAAACC CTGTTTCGCA CCCGCACGGG TAAGCTTATA
CCCATCTCTT TTAATGCCGC ACCCATCCTG GATGGCCATT TTTTGAGCGG CGGTGTGCTC
TCTTTTCGGG ATATTCGCGA TCAACGCGAA AAAGAGGAGC GGCTCAAGCT GGCCGCCAAA
ATCTTCAACC ACAGCCAGGA AGGGCTGGTG GTGCTGGATG CTGAGCGCAT AATCGTGGAT
GTCAACCCGG CCTTTAGCTA TATCACCGGT TACACCCGCG AAGAGGTCAT TGGCCGCTCG
CCTGAACTGC TACGCTCACA ACGTCATGAT GCCGCTTTTT ACCAATCTAT CTGGCAGCAG
GCGGAGAATC AGGGAAATTG GCAAGGCGAG ATCTGGCGGC GCCGTAAAAA TGGCGAGGAA
TTTCCCGAGT GGCTCTCTTT AAGCATCATT CGTGGTGAAA ACCAGCAGAT CAGTCACTAT
ATTGGCCTGT TTTCCGACAT TACCACCCGT AAAATTGCCG AAGAAAAGCT TAAACACCAA
GCCCATCACG ACCCGTTAAC GGGCTTGCCC AACCGTTCGT TGTTAGAGGA CCGTTTGCAA
CAAGCGGTCT CTAAGGCCAG ACGCTATGAG GGCAAAATTG CAGTGCTCTA TATTGATCTT
GACCATTTTA AACCGGTCAA TGATAACTAT GGACATGAAG CAGGAGATGC CGTCTTACGG
GAGATCTCAG CACGCATCCG CTATGAGTTG CGCCAATCGG ACACTGCCGC GCGGGTAGGT
GGGGATGAAT TTGTGGCCGT GCTTACCGAA ATACGTGAAG AACATTTGGT TATGGGGGTG
GCGCAAAAGC TTATCCACGC CATTCAAAAG CCCGTCAACT TTGGCAACGA AAGTTTCCAG
GTCGGCTGTA GTATTGGTAT TAGCCTCTAT CCGATCCACG GCAACAGTAT CACCAAACTG
CTTAAATCTG CCGATACGGC CATGTACCGC GCCAAGCAAG AGGGGCGTAA CCGTTTCTGC
GTGGCCACCT TGGATAAGGA GACGCAAAAT CCGTAA
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| Protein sequence | MHIAIVDDSP DDRLLLMRIL SKAGYSTLQL HDSGEAFLQT LGLTPTDTAS IAPFNPPHTS
LPDIIFMDVM MPDMDGLSVL RQLKANPPTQ NIPVIMVTGN DRPRDLAHAF EEGATDYITK
PIRRVELLAR LRSIIKLERA MQQVRSSEKR LRDLTASLGE GLLSVDNAQR IIFLNPAGEK
LLEYSESALH LTTLNEQLIP HTCGSLHDQQ SADHMLAALR GETEQISGET LFRTRTGKLI
PISFNAAPIL DGHFLSGGVL SFRDIRDQRE KEERLKLAAK IFNHSQEGLV VLDAERIIVD
VNPAFSYITG YTREEVIGRS PELLRSQRHD AAFYQSIWQQ AENQGNWQGE IWRRRKNGEE
FPEWLSLSII RGENQQISHY IGLFSDITTR KIAEEKLKHQ AHHDPLTGLP NRSLLEDRLQ
QAVSKARRYE GKIAVLYIDL DHFKPVNDNY GHEAGDAVLR EISARIRYEL RQSDTAARVG
GDEFVAVLTE IREEHLVMGV AQKLIHAIQK PVNFGNESFQ VGCSIGISLY PIHGNSITKL
LKSADTAMYR AKQEGRNRFC VATLDKETQN P
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