| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1492 |
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| Symbol | |
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| ID | 4483606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1823969 |
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| End bp | 1825843 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722234 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_865407 |
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| Protein GI | 117924790 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.411872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00494446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAATTTAG GTATTCGTGG CAAGCTGTTC CTGCTCTCCT TTATCCTGAT TTTGCTGGTG
GGTGCCTCGG TGGGCATGCT GCTGGAACTT GCGCTGGGCA ACTGGTTGCA AGCGCAAATT
CGCGGTGAAT TAGAGAGCTA TGCGCGGTTG GGGGTGGCGA GCCTGATGGA TCAACGGCTC
GACTATACCA TGACCGGGTT GGATGCGCTG GCCGATCATT TGGGGGAGAT TACCCAGTCG
CGTGTCACCA TTGTGGATGT GGATGGTCGC GTGCTGGGGG ATGGACGGGT GGCTCTGGCA
GCTTTACCGA GTGTTGACAA TCACGCCAAA CGTCCCGAAA TTGTGCAAGC CTATAAAGAG
GGGAGCGGGG CTTCCATTCG CTACTCGGCA ACCCTAAAGA CCGATATGTT CTATGTAGCC
CGGACTTATC ATCTCAAAGA TGGGCAGATG GGTGTGTTGC GGGTTGCCAA GCCGATGTCG
CAGTTGGCTC CCATTCGTGA GCGTCTGCGC TTAATGTTGG TCTTGGCGGG CATTTTGGCG
GTGTTGGCGG CTATGGGGGT CAGTTCCCTA GCGGCCCATT TTAGTACCCG CCGTTTCCGT
AAATTGATGG CCCAGGTTCA CGCCATTTCC AGTGAAGCCC TGAGCAGTTC GGTCGCTCCG
GTAGAGATGC AGCCGGGTGA TGAGTTGGGT CTATTGGGGG CCTCTTTCCG AAGTATGGCG
ATGGAGCTGC GGCGCAATGT CTCGTCGGTT ACACGGGAGC GACGTCTGTT GCAAGGGGTG
CTTCAGGGGA TGGCCGATGG CCTGTTGGTG GTGGATGATC ACAGCCGGGT AGTCTTGAGT
AACCCTCCGG CGGAGACACT GCTGGGGGTG GGCGAAGAGC ATGTGGGTGA GACCCTGCAA
AGTGTGCTGA GCTCACAATG TTACCAGCAG CTTAGTCAGG TGTTGCAGGT GGAAAACAAT
CTGCCGGGTA GTGTGGAACT CACGCTGACT TTTGGTGACG AAAGCCGTTT TGTGCAGGCG
CAGTGGACGC CGATGGAGGG CGAGCGCGGC TATATTATTG TGTTTCATGA TAATACCATA
CTGCGTAGGC AGGAGCAGAT TCGGCGGGAT TTTGTGGCCA ATGTCTCCCA CGAATTACGT
ACCCCCATTA GCATTCTTCA GGCGAATGCG GAAACACTGC TCAATGGTGC CCTTAATGAT
AAAGCCTATG GGGTGCAGCT GGTCAATGCC ATTGAGCGGC ATGCTATTCG GCTGTCGCAA
ATTATCTCCA AACTACTGGA TCTGGCCCGT CTGGAGTCCA ACGAGCTTAT CTTTAAGAAT
GAACCGCTGA ATATAAGCTC CATTGTCAAC AGTGTGCAGG AGCATATTAC CCCGCTGGCC
CAGGAAAAAA ATATTACCTG CTGGTCTATG ATTAAGCCCG AAGTGGTCTG TATGGGGGAT
CGTGAGGCGG TCGAGGAGGT GCTTAGCAAT CTGGTTTCCA ACGCGGTGAA GTATATACCG
GCGGGGGAGC AGATCTCCAT TACCTGTAGC GAGTTGCAAG GGTTTAACCG GATTGAGGTA
AGCGATACCG GTGCAGGGAT TGATGCCAGC CACCATAGCC GCGTATTTGA ACGTTTTTAC
CGGGTGGATA AGGGGCGTTC TCGGGATATG GGCGGCACAG GGTTGGGGCT CTCGATTGTT
AAGCAGATGG TGCGTAAGAT GGGCGGGGAT GTGGGGGTGG AGTCGGTCAA TCCCCATGGT
TGCCGTTTTT GGTTTACGCT ACCTAAAAAG ATGGAAGGAC AACGTGTTAC CCGCCCCGCA
ACCGGCCATC CTGCGATTTT GCCGGACGAT GCGCCGTTGG ATCTTAAAGG ACATGAAGTG
GGTCGCCACC CCTAG
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| Protein sequence | MNLGIRGKLF LLSFILILLV GASVGMLLEL ALGNWLQAQI RGELESYARL GVASLMDQRL
DYTMTGLDAL ADHLGEITQS RVTIVDVDGR VLGDGRVALA ALPSVDNHAK RPEIVQAYKE
GSGASIRYSA TLKTDMFYVA RTYHLKDGQM GVLRVAKPMS QLAPIRERLR LMLVLAGILA
VLAAMGVSSL AAHFSTRRFR KLMAQVHAIS SEALSSSVAP VEMQPGDELG LLGASFRSMA
MELRRNVSSV TRERRLLQGV LQGMADGLLV VDDHSRVVLS NPPAETLLGV GEEHVGETLQ
SVLSSQCYQQ LSQVLQVENN LPGSVELTLT FGDESRFVQA QWTPMEGERG YIIVFHDNTI
LRRQEQIRRD FVANVSHELR TPISILQANA ETLLNGALND KAYGVQLVNA IERHAIRLSQ
IISKLLDLAR LESNELIFKN EPLNISSIVN SVQEHITPLA QEKNITCWSM IKPEVVCMGD
REAVEEVLSN LVSNAVKYIP AGEQISITCS ELQGFNRIEV SDTGAGIDAS HHSRVFERFY
RVDKGRSRDM GGTGLGLSIV KQMVRKMGGD VGVESVNPHG CRFWFTLPKK MEGQRVTRPA
TGHPAILPDD APLDLKGHEV GRHP
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