| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1489 |
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| Symbol | |
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| ID | 4483603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1820382 |
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| End bp | 1822571 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722231 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_865404 |
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| Protein GI | 117924787 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00567966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGCGAT TAACCTCAAA TAATATATGG GTGTTTATTG CTGTTGTGGC GATGGGGGTT
GTCTCCCTTG TGACCCTGTT GACTTTTACC CGCCAAATTG ACCAATCCCA GCATCGGCAG
GTGCAGGGCC ATTTACAACA GCTCTATCGC TTGGATGCGG CGATGGATCA ATCCCTTGGC
TTGGTGCAGC ACGGCATGCT CACCCATTAT GATAGCTTTG TTCAATATAG TTTAGAAATA
AATCAAATTC TTAAAGCGCT AGATCCTGCT CAAGCACGCA GTGGGTTAAG CCGTAGCGAT
GAGATGGTGT CACTCTATCA AGGGCTACTA AAAAGTTGGC AAGAGAAGCT TTGGTTGGTG
GAGCGGTTTA AATCGGACCA AGCGGTTTTG CGCAACTCAT TGCGCTATTT TCCGCAGGCT
CTGATGGAGA TTACCGAGCA GCTTGACCAC AATAAGCCGG AATTGACTGG CTTCGATGCC
AACCAAGCGC GCGTTATGAG CCGGCAGCTA ACCTTATTGC TGCGTTTGAC CTTGGTCAGT
AACAACCGGG GTCCGGAGCA GGATTTGTGG GCATTGGGGC AGTCCCAAGA GCTCATCCTA
ACTCTATTGG AACAGCATCA GGGAACACTG GTTCAGCAGG TGCGTAACCT GATGGAGCAT
GGCGCGTTGA TCCATAAATT TCAAATGAAG GTGAACCGTT GGAGCCAAGA CGCGGTTGCG
CAACCCACCG AGCGGCAATT GGATCGCTTG GCTGAGAGCT ACTATGCTGC ATTTGAGGGG
GATTTGCGAC GGGCTGATCA ATTGCGCTTG TGGATGTACC TGTTGACTCT GGTGCTGATC
GGTGTGGGGA TGTTGGTAGC GCGCAAGGTG ATGCTGTTGC GTTTGGCCCA TGCCCAGCAG
GAGGCCTTGG TGGCACAGCG GACGACTGAG TTACGACGGG AGCTGTTGGA GCGTCGTAAG
GCCGAAGAGC GGTTTCGCTC GGTGGCGGAA TCGGCGGGGG ATGCCATTCT AGCGGTGGAC
CGTCATGGTC GTATTAGTTT TTGGAACCGC AGTGCAACCA CCATTTTTGG TTATGAGTAT
GCCCAGGTAA AAGGGCGCAG TCTGGAGATG TTGGTGCCAG AGCATCAACA GAGCTTTTAC
CAACATATTT TGCAAGCGTC GTTAAAGGCG GATGCCTTGC TCAAGCCCCG CGAGGTGCAA
ACCTTGGAGG CCCAGCGAGC CGATGGTACG ATTTTTCCCG TAGAGGCTTC ATTAGCCAGT
TGGAAAACCG GCGGAAAGCG ATTTTTTACG CTGGTTATCC GGGATATTAC TGAACGTAAG
GCGATGGAAG ATCGCCTGCA CGCCACTCTG AACTCGTTGG ATGCCAAGGT GGCGGAGCGT
ACCTCGGAGT TGCAAAGCCG GATGGATGAG CTTAACCGTA CCCGTGACCA GTTGGTCAGT
AGTGAAAAGA TGGCCTCTAT TGGTCGGTTG GCGGCGGGGG TGGCCCATGA GATCAACACA
CCCATTGGCA TTGCGGTGGG GGCGGCTTCG CAAAATCGTG AAACCACCAA CCGTATTCTG
GCGATGCTAG AGCAGGAAGA GGTGGATGAA GAGTCGTTGG TCGAAGAGCT CAAGAGCTTG
GATAAACTGG CCCATTTAAT CAGCAATAGC ATGGAGAAAG CGGCCAAACT TATTCGGGTT
ATGCGGCGTT TTACCCATAT CTCGACCGAT TGGCAGTTGG AGCCATTGGA TATGGAAAGT
GCCTTGCTGG AGATTGTCGA TCCGTTGCGT CCAATGTTTG ACCAGCAACA TGTGGTGTTG
CAGATTAAGG TTGAGCAAGC CTTGCAGGTG ATGAGTCGGA AAGATCTGGT GCAGGAGATC
TTTTCAGACC TGCTTAATAA TACCCTGGTC CATGCTTTTC CCCAGCCGGG CGGGGGGGAG
GTGAAGATTG TCATAAGCTA TGTCGAGGGG GAGGTTTTAC TCAACTATCA GGATGACGGG
ATCGGCATGG ATGAGGTCGT GCAACAGCAG ATGTTCGAGC CTTTTTTTAC CACGGCCCAT
CCTGAGGGGC GCTACGGTTT GGGCCTCTAT TTTTTACAAA CCCTGGTGCA AGGGCAGCTA
CAGGGCCGAG TGCTTTGCCA AAGTGGCACA GGTGAAGGGG TACGCTTTGA GATCTGTTGG
CCCTGTGAAA GGGTGTTGGT GCAGCCCTAA
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| Protein sequence | MMRLTSNNIW VFIAVVAMGV VSLVTLLTFT RQIDQSQHRQ VQGHLQQLYR LDAAMDQSLG
LVQHGMLTHY DSFVQYSLEI NQILKALDPA QARSGLSRSD EMVSLYQGLL KSWQEKLWLV
ERFKSDQAVL RNSLRYFPQA LMEITEQLDH NKPELTGFDA NQARVMSRQL TLLLRLTLVS
NNRGPEQDLW ALGQSQELIL TLLEQHQGTL VQQVRNLMEH GALIHKFQMK VNRWSQDAVA
QPTERQLDRL AESYYAAFEG DLRRADQLRL WMYLLTLVLI GVGMLVARKV MLLRLAHAQQ
EALVAQRTTE LRRELLERRK AEERFRSVAE SAGDAILAVD RHGRISFWNR SATTIFGYEY
AQVKGRSLEM LVPEHQQSFY QHILQASLKA DALLKPREVQ TLEAQRADGT IFPVEASLAS
WKTGGKRFFT LVIRDITERK AMEDRLHATL NSLDAKVAER TSELQSRMDE LNRTRDQLVS
SEKMASIGRL AAGVAHEINT PIGIAVGAAS QNRETTNRIL AMLEQEEVDE ESLVEELKSL
DKLAHLISNS MEKAAKLIRV MRRFTHISTD WQLEPLDMES ALLEIVDPLR PMFDQQHVVL
QIKVEQALQV MSRKDLVQEI FSDLLNNTLV HAFPQPGGGE VKIVISYVEG EVLLNYQDDG
IGMDEVVQQQ MFEPFFTTAH PEGRYGLGLY FLQTLVQGQL QGRVLCQSGT GEGVRFEICW
PCERVLVQP
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