| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1474 |
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| Symbol | |
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| ID | 4483086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1798937 |
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| End bp | 1801726 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722215 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_865389 |
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| Protein GI | 117924772 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0304029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.195737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAA CATCGTTGCC AAAATCCTAT GACCCCACCG GTGTGGAACA GCGCTGGTAT
CAAACCTGGG AAGAGCAGGG GTGTTTTAAA CCCAGTGGTC TAAGTGCGGC CAACGCCTAC
TGCATCATGA TCCCCCCCCC CAATGTGACC GGCAGCCTGC ATATGGGGCA CGCTTTTCAA
GATACCATCA TGGATGCCCT GATCCGCTAC AACCGCATGC AGGGGCATAA TACCCTGTGG
CAGTGTGGGA CCGATCATGC CGGCATCGCC ACCCAAATGG TGGTGGAACG GCAACTCGAA
GCCGAGGGTA AAAGCCGCCA CGATCTTGGC CGCGATGCCT TTATTGAACG GGTTTGGGAG
TGGAAAGCCA GCAGTGGTAA CACCATTACC AAACAGCTCC GCCGAATGGG GGCTTCCTGC
GATTGGAGCC GTGAACGCTT TACCATGGAT GACGGACTCT CCGAGGCGGT CAAAGAGGTG
TTTGTTCGCC TCTATGAAGA AGATTTAATC TACCGTGGTA AGCGCTTGGT CAACTGGGAC
CCGGTGTTGC ACACGGCGGT TTCGGATCTG GAAGTAATCA GCGAGGAAGA GCAGGGCCAC
ATGTGGCACA TGCGCTACCC CATGGTCGAG GGCGATGGCT TTTTGGTGGT GGCAACCACT
CGACCAGAAA CCATGCTGGG GGATAGCGCC GTGGCGGTGC ATCCCGAAGA CGCGCGCTAC
CAGCATCTGA TCGGCAAGCA GGTGGTGTTG CCCTTGACGG GTCGCACCAT TCCTGTGATC
GGGGATGACT ATGTTGATCC TGAGTTTGGT TCTGGCTGTG TCAAGATCAC ACCAGCCCAC
GATTTTAATG ACTATGAGGT AGGCAAACGG CACAATCTGC CCCAAATGAG CATCTTTACC
GTGGATGCCT GCATCAATGA GGATGCCCCA GCCCGCTACC GGGGAATGGA TCGCTACGAG
GCGCGTAAAC GCATTGTGGA GGATCTGCAA GAGGCAGGTT TGCTGGAAAA AATAGTCGAC
CACAAACTCA TGGTGCCCCG TGGTGACCGT ACCAAGGCAG TCATTGAGCC GTTGTTGACC
GATCAATGGT TTGTGACCAC CGCCCCCTTG GCCGCTGAGG CGATTAAGGT GGTGGAAGAG
GGGCGCATTA AATTTGTACC GGAAAACTGG TCCAAAACCT ATTTTGAATG GATGCGGAAT
ATTCAAGATT GGTGCATCAG TCGCCAGATA TGGTGGGGCC ACCGCATTCC CGCTTGGTAT
GGTCCCGATG GTCAGGTGTT TGTCTGCCGC ACCCAAGAGG AAGCGTCCCA AAAAGCCAGC
CAGCACTACG GTAAGCCGGT GGCGCTAACC CAAGATAATG ATGTGCTGGA TACCTGGTTC
TCATCGGCAC TATGGACCTT TTCGACCCTG GGTTGGCCAG AAAAAAGCCA AGAATTGGCC
TCTTTTCACC CCACAAACGT GCTGGTTACA GGTTTTGACA TTATCTTTTT TTGGGTAGCC
CGCATGATTA TGATGGGGCT GAAATTTACC GATGAAGTGC CCTTTCATAC CGTCTATGTG
CATGGTCTGG TGCGCGATGG CGAGGGGCAT AAAATGAGCA AATCCAAGGG TAATGTCTTG
GACCCGTTGG ATCTGATCGA CGGTATTAGC TTGGAGGATC TGGTGGCCAA GCGTACGCGG
GATATGATGC AGCCCCATCT GGCCAAAAAG ATTGAAAAAC AGACCCGTAA AGAGTTCCCC
GATGGCATCG CCGCCGCAGG TACGGATGCC TTGCGCTTTA CCTTGGCATC GTTGGCGACC
CAGGGGCGGG ATATCAAGTT TGACCTGGGA CGGATGGAGG GCTACCGTAA TTTTTGCAAT
AAGTTATGGA ATGCCTCGCG CTTTGTGCTC ATGAATGCAG AGGGCCAGGA TTGCGGGCTG
GAACGGGTGG ATCTGCCCCT ATCGGTGACC GATCAGTGGA TTGTGAGCAA ATTTCAGCGC
ACCGCCCGGG ATGTTACACA GGATATTGAA AATTATCGCT TTAGCGATGC GGCCAATACG
CTCTATCAAT TTTTGTGGGG CAGTTATTGC GACTGGTACT TAGAGATGGT GAAAACCACG
CTCTATGATG AGAACGCCGC AGAGGCGGCC AAAGCGGCGG TACGGCACAC CATGGTTGGG
GTGTTGGAGG CCTCCTTGCG GCTGCTCCAT CCGTTGATGC CCTTTATTAC CGAAGAGTTG
TGGCAAAAGC TGGCCCCTCT GGCGGGCAAG CCCGCAGGTA GCATTATGCT GGCCCCTTGG
CCCGAGGCCG ATGAAGGCCG TATTTTAGAC CAAATTGAGA GCGAAATTGA CTGGGTGCAG
CGCTTTACCA GCACCATTCG TGGTATCCGT AGTGAAATGG ATATCCCTCC CAGCAAAAAG
ATCCAGGTCT TGGTGCGTGG TGACGACAGT GCGGTGGCCC GTCTGCGGCG CCATGTGAGT
ACCGTTACCG CCCTGGCCAA ATTGGAGGGG TGGGCGGTGT TGCAGGATGA GGCTCCGCAA
GGCTGCGCCA CGGGGGTGTT GGAGGATATG CAGCTGTATA TCCCCATGAA GGGCCTCATT
GATGTGGCCG CCGAGAGCGC CCGTTTGCAA AAAAGCTTGG ATAAGCTGGA TGCCGATTGG
CAGCAAGTCA CAAGAAAACT GAGCAACGAA AATTTTATTG CCAAGGCCAA TCCCGAAGTG
GTTGCCAAAG AGCGGGATAA AGCCAATGAA CTGATGGAAA AAAAGCGTGC CGTGCAGGAG
GCTCTAACAC GCATTCAGGC CATGGCATAG
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| Protein sequence | MQETSLPKSY DPTGVEQRWY QTWEEQGCFK PSGLSAANAY CIMIPPPNVT GSLHMGHAFQ
DTIMDALIRY NRMQGHNTLW QCGTDHAGIA TQMVVERQLE AEGKSRHDLG RDAFIERVWE
WKASSGNTIT KQLRRMGASC DWSRERFTMD DGLSEAVKEV FVRLYEEDLI YRGKRLVNWD
PVLHTAVSDL EVISEEEQGH MWHMRYPMVE GDGFLVVATT RPETMLGDSA VAVHPEDARY
QHLIGKQVVL PLTGRTIPVI GDDYVDPEFG SGCVKITPAH DFNDYEVGKR HNLPQMSIFT
VDACINEDAP ARYRGMDRYE ARKRIVEDLQ EAGLLEKIVD HKLMVPRGDR TKAVIEPLLT
DQWFVTTAPL AAEAIKVVEE GRIKFVPENW SKTYFEWMRN IQDWCISRQI WWGHRIPAWY
GPDGQVFVCR TQEEASQKAS QHYGKPVALT QDNDVLDTWF SSALWTFSTL GWPEKSQELA
SFHPTNVLVT GFDIIFFWVA RMIMMGLKFT DEVPFHTVYV HGLVRDGEGH KMSKSKGNVL
DPLDLIDGIS LEDLVAKRTR DMMQPHLAKK IEKQTRKEFP DGIAAAGTDA LRFTLASLAT
QGRDIKFDLG RMEGYRNFCN KLWNASRFVL MNAEGQDCGL ERVDLPLSVT DQWIVSKFQR
TARDVTQDIE NYRFSDAANT LYQFLWGSYC DWYLEMVKTT LYDENAAEAA KAAVRHTMVG
VLEASLRLLH PLMPFITEEL WQKLAPLAGK PAGSIMLAPW PEADEGRILD QIESEIDWVQ
RFTSTIRGIR SEMDIPPSKK IQVLVRGDDS AVARLRRHVS TVTALAKLEG WAVLQDEAPQ
GCATGVLEDM QLYIPMKGLI DVAAESARLQ KSLDKLDADW QQVTRKLSNE NFIAKANPEV
VAKERDKANE LMEKKRAVQE ALTRIQAMA
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