Gene Mmc1_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1472 
Symbol 
ID4483084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1796208 
End bp1796669 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID639722213 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_865387 
Protein GI117924770 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000866055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.23616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTGG AAATTGGAGC GAGCATACCG AGTCTAAGCC TACCTGATCA AAGCGGCGAA 
GAGCGGTCGT TAAAAGAATT GCTGGGGGAA AAGGGGGCCG TGATCTATTT TTACCCCAAA
GATAACACCC CTGGCTGCAC CACCGAGGCA CAGGATTTTG AGGCTCTCAA GGGTGAATTC
GCCGCTAAGG GATATACTAT TATTGGCATC TCTAAGGATT CGGTCAAATC CCACACCAAT
TTCATTAGTA AGTATGATCT AAGCTTCACC CTGCTGGCCG ATGTTGAGGT AAAGGGGTGC
GAGGCGTTTG GGGTGTGGCA AGAGAAGAAA AACTATGGCA AAACCTACAT GGGTATTGTG
CGTTCGACCT TTGTGGTGGA TGGTGACGGG GTGGTAAGTC ACGTTTACAA AAAAGTGCAG
GTTAAAGAGC ATGCCCAGAA AGTCTTGGCA GCGCTGGGGT GA
 
Protein sequence
MVLEIGASIP SLSLPDQSGE ERSLKELLGE KGAVIYFYPK DNTPGCTTEA QDFEALKGEF 
AAKGYTIIGI SKDSVKSHTN FISKYDLSFT LLADVEVKGC EAFGVWQEKK NYGKTYMGIV
RSTFVVDGDG VVSHVYKKVQ VKEHAQKVLA ALG