| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1466 |
|---|
| Symbol | |
|---|
| ID | 4481521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1788353 |
|---|
| End bp | 1789138 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639722207 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_865381 |
|---|
| Protein GI | 117924764 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000484673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGC AACTGCACAT CCTGATTGTT GACGATCAGC CATCCAACTT AAAGGTGGCC
CGTGGCCTAC TGGCCAATAT CTGTGGTGAG GGTGTGCAAA TTGATACCGC AGAGGGGGGC
GAGCAGGGGG TGCTCATGGC CAGCCAACAG CGCTATGATC TTATTTTTAT GGACTGTCGC
ATGCCAGGTG TGGATGGTGG TGAGGCAACT CGGCGCATCC GTGCCGCTGA ACAGAGCAAC
CATTACCAGC GGGTGCCGGT GATCGCCTTA ACGGCTGAGG CGCAAGATCA AGCCCAAAGC
ACCTGCGATC AGGCTGAGCT GGATGATGTG CTGCACAAAC CGGTGGATCT GCATGCCATG
CTAGCGGTTC TGCGTATTCA CCTGCCCCAA CACCCTTGGG GTGTGGCGAT ACGCCCCCAG
GAGCGTATCA CGCCATTAAC CCCCATACAG CCTGCCCAGA TTGATGTGGA CGATGCTATG
CGTCAAATGG GCTTGCCTGA AGAGGCCTTT GCCGAGGTGG CTCTGGTCAT TTTAGAGCAG
GTACCAGAAC TTTTATCACC GCTGGCGCGA GCGATTCAGC AGGGGCACTT TGAACAGGCC
CGCGAGCTGT CGCATATTCT TAAAGGGAGT ATGGTCAACG TGCTGTTTCC CTCATTGGCC
GGTCTGGCGC TGAGCATGCA CGAGGCGATT CGGGCTGAGG ACGCAGAACG GGCCTGGAGC
CGTTATCAGC GGCTGGCCGA TGCCTACGCC CCCATTCTTC AAACCCTGCG TCAGCGTCTG
CATTAA
|
|---|
| Protein sequence | MPQQLHILIV DDQPSNLKVA RGLLANICGE GVQIDTAEGG EQGVLMASQQ RYDLIFMDCR
MPGVDGGEAT RRIRAAEQSN HYQRVPVIAL TAEAQDQAQS TCDQAELDDV LHKPVDLHAM
LAVLRIHLPQ HPWGVAIRPQ ERITPLTPIQ PAQIDVDDAM RQMGLPEEAF AEVALVILEQ
VPELLSPLAR AIQQGHFEQA RELSHILKGS MVNVLFPSLA GLALSMHEAI RAEDAERAWS
RYQRLADAYA PILQTLRQRL H
|
|---|
| |