Gene Mmc1_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1461 
Symbol 
ID4481516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1781599 
End bp1782150 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID639722202 
Producthypothetical protein 
Protein accessionYP_865376 
Protein GI117924759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.790498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.683662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTT TAAATTTTAG AGTGGGCATC GCCCTTGCCC TACCGATTTT AGTGCTCATT 
GGCATGGTGT TGCAACAAGG GGCCTACTTC TCCCAAAGCC CTGTTGTCAC CCTACCCATT
GAGGGTTTTG ACCCCCGCGA TCTGCTTGCT GGGCACTATT TGACCTACCG CATTCGCTAT
CCGGTCAAAA ATCTGTGTCA ATCCCCTCCC GGCCAAGCTC AACCGCGCCG TGGTGCGCCC
CCCCTAACCG CGCCCAAACC GGCAGCAGCT GTGCAGGGGT TTGTCTGCCT GGATCCCCCG
GGCTTTAGCT TTCAGCAACC TACCCCCAAC CAGTGCGGTG TCTGGCTAAC GGGTCTCTGT
GAACGGGGGC AACTCATCGC TGGGGTTGAG AAATTTTACA TCCCCCAGGA GATGGCCCCT
GACCTAGAGC AGGCGGTGCG CACCCAGCGG GGGGAGATTA CCCTACGCAT TCACCCCCAT
GGCCGTGCCC AGGTTAAGAT GCTCTTTATT GACGGGCAAC CTTGGGACCA TTGGATCAAA
GCATCCCACT AG
 
Protein sequence
MKILNFRVGI ALALPILVLI GMVLQQGAYF SQSPVVTLPI EGFDPRDLLA GHYLTYRIRY 
PVKNLCQSPP GQAQPRRGAP PLTAPKPAAA VQGFVCLDPP GFSFQQPTPN QCGVWLTGLC
ERGQLIAGVE KFYIPQEMAP DLEQAVRTQR GEITLRIHPH GRAQVKMLFI DGQPWDHWIK
ASH