| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1456 |
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| Symbol | |
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| ID | 4481511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1772290 |
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| End bp | 1777161 |
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| Gene Length | 4872 bp |
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| Protein Length | 1623 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722197 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_865371 |
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| Protein GI | 117924754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.499589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG GCAAATCTTC CGGTTTTAAT CCCGAATCCT GGGTCGAGGC CTCCGTGCTG
CCGCTGCTGG CCAAAGAGGA TCACCCTTTA GCCAAAACCT TTTTGGTCCA GGTACTCAAC
GAGCTACTGG TCAGCCATGC GCTCAACCGG GCCGCTTGGT GCGATGTGAC CGCCATGGCC
CATCTATTTG GGCTGTTTCA AGCCCATCTA TTGGCCAAAT CCGACGCTGT TAAGCTGCAC
GTCAGCCACC AGCAGCACGA TACCTGTAGC ATTGAGGAGG TCACCTGCAT CCAAGAGGGC
ACGCGCATCT ATATTCACCT GCACGACACC CCCTTTATGT TGGATACGGT CCGCAACTAC
CTCAAACAGA GCAAGCTGAC CATCTATGCC CAAGCCCATA CCACGGTACA TGTTAAACGT
AGCCGCACCG GTGAACCCGT GGCCCTGGCC CAGACCGATA CCAAAGGCTA CCTGCGGGAG
ATGGTCATTC TCATCCTCAG CGAGACGGTG GATGACAAAC ACCTGGAGCA GATTCGTGAC
GAACTTCAGG CGGTTTTAAC CTCGGTCAAA CGCTCGGTGG ATGATTTTGC AGCCATGCAG
CAACAGGTGC TTGCCCAAGC GCTGCTGCTA GATGGCGAAA AACTCACCGA AGAGGCCAGT
TTTTTCCGCT GGATGGCCGA TGAAAACTTT GTCTTTATGG GCACCCGTTC CATCATCGCC
AGCGGTGAGC AGCTGGTTGT GGATCAAGCG GTGCCTTCGT TTGGGGTCCT GCGCGGCCAC
GACTCCACCG CGCTATTGGA TCGCATCATG CCCGGCATGC GTCAGGAGAT TGAAAAGATT
TTAAATCTGT TGGTCAAACG GCATGGACAG GATCCCCACC CCAAACTGGC CATTGAGTAT
TGTGAACATG GCCGCTCCAT CATCTACGCC GCTGAAGGGG TGGATTTTGT GGTGCTGCTG
CGCCCTGCAA ACCCGAACCA AGCCACGCTT GTATTAACCT TAATCTTGGG GCGTTTCTCC
CGTACCGGTT TGGCAAGCCG TGCTTCTAAT GTGCCTATTT TATCCCGACG CCTTGAGAAA
ACCCTTCAAC TGTCTGGCTT TACCGAAGGC AGCTATCTCC ACCATGAATT CCGCAGCCTG
TATGACCGCA TGCCCTTACG GGAGCTGCTC TACTCCAACA GTCCGGTCAT TACCGAGCAG
ATCAAAGAGA TTTTGCTAAT GGAGGGGGAT AATGATGTGC GCGTATTGGC CCGCTTGGGC
CACTATGGCA ACTATGTCGC GGTACTCACC ACCCTGGCCC GCAGCCGTTA CCACCCACGG
CTACAAACAC AGATTGCCGA GCTCTACTCC AAGCAGCTAG ATTTTCCCAT CTCTTCGATC
AACAGCACCG ATAATGGTAC GGTCCATACC GTGGTCTGTT ACGCCAACCA TGAGCCAGAC
AAACCCTTTG GCTTTAACCG CACCGCCATA GAGGCCCAGG TGCGCCGCCT TGTCATGACC
TGGGAGGACC ATCTGCGGGA GGAGCTCTTA ACCAAATATG CCCCACGCCT CGCTTTTCAG
CTCTGTACCC GCTACAGCTC GACCTTTAAC ATTCTCTACA AGGAAGCCAC CCCCGCCGAT
CAGGCAGTGC TGGATATTGA AATGTTGGAA AAATTGGTGG AGGGGAGCTC CTTTACCAGC
CGCATTGCCC ACTATCCCAA GGGTCAAGTC TATATCAAGC TCTATGCCCA CAAACCGGCC
ATGCTCACCA AGATTGTACA AACTTTTGAC AATTTTGGCA TTAGCTGTCT GCATGAGTTC
TCTACCGAGG TCATGCTGGA AGCCAACAAA CCATTGACCA TCCAACGATT TGAGGTGGGG
GGTAGCAGCG CCCAGATTAG TGCCTTGCTT AACCGGGCAG AGCTCTTTTG TGAGGCACTG
AATGCGGTGC AAGAAGATGC CATTCTTGAT GATAAACTCA ACAAGTTGGT ACTTATCCAG
GGCTTTCACC CCAAAGAAGT GATGTTGATG GAGGCCCTGC GCCAATATTT ATTGCAGATC
CGCCCGGAGC TCTCCACCAA AAAGCTCAAC CGGGTACTGC TGGAGCATCA CCCCCTGACC
AAGCGCATTC TTAACCTCTT TATCGCCCGT TTTGATCCCG TTGGGGAGCG TGGCCGTAAA
AAGCGTATCA AAGAGATTTT AGATGGCCTT GAAGAGGGCT TGCAAGGGGT TGCCAACCTA
CAGGATGACC AGGTTATCCG CGCCTTGACC AATGTTGTGA CCAGCGCCCT ACGTACCAAT
TTTTATCAGC AACGGGGCTG CCATGGCATC AGCTTTAAGG TGGATTGCAG CGCCATCGAT
CAAATGCCCT CACCCCGCCC CTGGCGCGAG ATTTTTGTGC TCAGCCCGCA TATGGAGGGG
GTCCATCTAC GGGGCGGACG GGTTGCTCGG GGTGGACTGC GATTCTCGGA TCGGTTAGAG
GATTTCCGTA CCGAGATTTT GGGTTTGATG AAGACTCAGA TGGTCAAAAA CAGCATCATT
GTGCCCATCG GTGCCAAGGG CGGTTTTATT GTGCCCCGCA TTGCCGATAT CCCCGCCAAC
CAGCGTAAGG AGTGGGTAGA AAACCAGTAC AAAACCTTGA TCCGGGGTTT GCTGGATATT
ACCGACAACC GTGTCGAGGG TGAGCTGGTC TACCCGGAGC AGGTGGTGCG TTATGATGAG
GCCGACCCCT ATCTGGTGGT CGCCGCCGAT AAAGGTACCG CTACTTTTTC GGATATTGCC
AACGGTGTGG CCGAGCAGGA GTATCATTTT TGGTTGGGGG ATGCCTTTGC CTCTGGTGGT
TCTTATGGGT ATGACCATAA GAAAGTGGGC ATCACAGCCC GTGGCGCATG GACCTGCATT
CGTCAACACT TTGCTGAATT GGGTCACGAT ATCGACAGCC AACCCTTTAC CGTGGTGGGC
ATCGGCGATA TGAGCGGAGA TGTGTTTGGC AATGGCCTGC TGGCCAGCCG CCAGATCAAG
ATGGTCGGGG CCTTTAACCA CCTGCACATC TTTCTGGATC CCGATCCTGA CCCGGCCAGC
AGTTTTGAGG AGCGGCAACG GCTGTTTAAC CTGGGGCGCT CCGGTTGGAA CGACTACAAT
GGGGCGCTCA TCTCCACAGG TGGGGGGATT TTTAACCGCT CGGCCAAGGC CATTCCCCTC
AATGATACCC TGCGTAACCT GCTGGACACC AAATCCGAGA CCCTCTCCGG GGAACAGGTG
ATCCAAAAAC TGCTGCTCGC CAAAGTTGAT CTTATCTACA ATGGCGGCAT TGGTACCTAT
GTTAAATCCC GCTATGAGAC CCACCTTGAT GTCTCGGACA AAGCCAACGA TTCGGTACGG
GTAGATGCCC ACCAGATGCG TTGCCGCATC ATCGGCGAGG GGGGCAACCT GGGCGTTACC
CAAAAGGGTC GTTTAGAGTT TGCCATGAAT AAGGGGCGCA TCAACACCGA TGCGGTGGAT
AACTCCGGTG GTGTTGACCT GAGTGACCAT GAAGTTAACC TGAAAATTTT GTTTGCCCAC
CTAGAGCAGA TTGGTGAACT GCCCTCCCGT CAGGCGCGTA ATGAGCTGTT GGCCCACTTG
ACCGAGCAGG TGGCTGAGAA GGTGCTTGAA GACAACCATT TGCAGCATAT GGCCATGAGC
CGCGATGAGC TGCTGAGCGG GCAAAGCCCC GAGATCTATC TTGAAGGGCT GGATATTTTG
GAGGAGGTCG CCGGGCTGGA CGCCGACGAA GAGGATGTGC CCCAACGCGA GCAGCTGGTG
GAGTATTTGG AGAACCACCC CATGCCACGC CCTTTATTGG CCATTATGCT GGGTTATACC
AAGCTTTTTG CCTATCGTGA GCTGCTCAAA AGTGATGTGG TGGATCTGTT TTTCTTTGAG
CGCTATCTGG TGGACTATTT CCCGGATCTG GTGGCTAGGG ATTATGCCCA AGAGCTCACC
AAGCACTTTT TGAAGCGGGA GGTGATCGCT ACCAGCGTCA CCAATCGGGT GGTGAACCAA
ACCGGGGTGG GGCCGCTGCT CGCCACCTAT AACAAGGTGC GTCGCAGTCG GTTGGATGTG
CCGCCTCTGC CTATTTTGTT CAAAGCCTAT GTGATTGCTG AAAACATGGT GGATGCACCT
GCCTTTCGTG CCCAAGTACA CGGGTTGGGC GGCAGATTAT CGGCATCGGT TAAGTACCAG
GTTTTAGCCG ATATGGAGGG GGTGTTGCTG CATCTGGCCG CATGGATGTT AACCCACCTG
TCCAGCGACC GTATTACGGT GGATGTCATC AACCTGTATG GCAAAGTGAT TGGGGCTTTT
CAGGGACGCT TGTGGGACTC CCTACCCGAA CTGCTCGCAG GGGAGCAGGT CAATGAATTG
ATCAAACGCC GCAAACAGTT GGTCAAGATG GGGCTGCCCG AGTCTTTGGC GACAGACACG
GTTCTGCTCC CCTACATGAA GGATGCCATG ACCATTTTGC ACATCAAAGA GGCCCTGCAT
GTGCCCTTTG AACCGGTTGG GCACCTCTAC ATCCGGGTGG ATGATTTCTT TGGCATTTCA
TGGATTGAAG AAAATCTTCA GCAGATTCGC CACCGGGATA TTTGGGGCCG CATGAACCTG
GAGAATGTGC GCAAAGAACT GTGGGAAACC CGTACCCGCT TGGTCAAAAA GATTATCTCT
TTTAAACGCC AAAATGAGTC GGTTGGGGAT GCCTTTCAGA GTTATATCAA TGAGGTAAGC
GGGGCAAATA AAGAGTATAT GGCGCTCTTT AGCGAGTTAA AGGCCCAGAG CAAGCACGAT
CTACTCCCCC TTTCGGTGTT GGTGCGCAAA CTGCGGGAGA TGCTGCTCCA CGAACAGGAA
GAGGAGTATT AA
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| Protein sequence | MSEGKSSGFN PESWVEASVL PLLAKEDHPL AKTFLVQVLN ELLVSHALNR AAWCDVTAMA
HLFGLFQAHL LAKSDAVKLH VSHQQHDTCS IEEVTCIQEG TRIYIHLHDT PFMLDTVRNY
LKQSKLTIYA QAHTTVHVKR SRTGEPVALA QTDTKGYLRE MVILILSETV DDKHLEQIRD
ELQAVLTSVK RSVDDFAAMQ QQVLAQALLL DGEKLTEEAS FFRWMADENF VFMGTRSIIA
SGEQLVVDQA VPSFGVLRGH DSTALLDRIM PGMRQEIEKI LNLLVKRHGQ DPHPKLAIEY
CEHGRSIIYA AEGVDFVVLL RPANPNQATL VLTLILGRFS RTGLASRASN VPILSRRLEK
TLQLSGFTEG SYLHHEFRSL YDRMPLRELL YSNSPVITEQ IKEILLMEGD NDVRVLARLG
HYGNYVAVLT TLARSRYHPR LQTQIAELYS KQLDFPISSI NSTDNGTVHT VVCYANHEPD
KPFGFNRTAI EAQVRRLVMT WEDHLREELL TKYAPRLAFQ LCTRYSSTFN ILYKEATPAD
QAVLDIEMLE KLVEGSSFTS RIAHYPKGQV YIKLYAHKPA MLTKIVQTFD NFGISCLHEF
STEVMLEANK PLTIQRFEVG GSSAQISALL NRAELFCEAL NAVQEDAILD DKLNKLVLIQ
GFHPKEVMLM EALRQYLLQI RPELSTKKLN RVLLEHHPLT KRILNLFIAR FDPVGERGRK
KRIKEILDGL EEGLQGVANL QDDQVIRALT NVVTSALRTN FYQQRGCHGI SFKVDCSAID
QMPSPRPWRE IFVLSPHMEG VHLRGGRVAR GGLRFSDRLE DFRTEILGLM KTQMVKNSII
VPIGAKGGFI VPRIADIPAN QRKEWVENQY KTLIRGLLDI TDNRVEGELV YPEQVVRYDE
ADPYLVVAAD KGTATFSDIA NGVAEQEYHF WLGDAFASGG SYGYDHKKVG ITARGAWTCI
RQHFAELGHD IDSQPFTVVG IGDMSGDVFG NGLLASRQIK MVGAFNHLHI FLDPDPDPAS
SFEERQRLFN LGRSGWNDYN GALISTGGGI FNRSAKAIPL NDTLRNLLDT KSETLSGEQV
IQKLLLAKVD LIYNGGIGTY VKSRYETHLD VSDKANDSVR VDAHQMRCRI IGEGGNLGVT
QKGRLEFAMN KGRINTDAVD NSGGVDLSDH EVNLKILFAH LEQIGELPSR QARNELLAHL
TEQVAEKVLE DNHLQHMAMS RDELLSGQSP EIYLEGLDIL EEVAGLDADE EDVPQREQLV
EYLENHPMPR PLLAIMLGYT KLFAYRELLK SDVVDLFFFE RYLVDYFPDL VARDYAQELT
KHFLKREVIA TSVTNRVVNQ TGVGPLLATY NKVRRSRLDV PPLPILFKAY VIAENMVDAP
AFRAQVHGLG GRLSASVKYQ VLADMEGVLL HLAAWMLTHL SSDRITVDVI NLYGKVIGAF
QGRLWDSLPE LLAGEQVNEL IKRRKQLVKM GLPESLATDT VLLPYMKDAM TILHIKEALH
VPFEPVGHLY IRVDDFFGIS WIEENLQQIR HRDIWGRMNL ENVRKELWET RTRLVKKIIS
FKRQNESVGD AFQSYINEVS GANKEYMALF SELKAQSKHD LLPLSVLVRK LREMLLHEQE
EEY
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