Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1446 |
Symbol | |
ID | 4480622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1758814 |
End bp | 1759731 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722187 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_865361 |
Protein GI | 117924744 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0162555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.124024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGGCG GATTTTCCCT TTTTAGTCTG GTTTTATTAA TGGTCATTGT GCTGTTGATT TTCATGGGGG TAAAGACCGT GCCCCAAGGG TATCACTATA CGGTGGAACG GTTTGGTAAG TTTACCAAAA TTTTACGTCC GGGGCTTAAT TTTATCACAC CGTTTTTGGA TGCCGTAACC CACAAGATCA ACATGCGTGA GCAGGTGTTG GATATTGATG CACAGAGTGT CATCTCCAGC GACAATGCGG TGGTACAGGC TGATGGTGTG GTCTTTTATC AAATTGTGGA TGCCGCCCGT TCCAGCTACG AGATCAGCGA TCTCCACTTG GCCATGCGCA ACCTTTGCAT GACCAATATT CGTTCGGTGT TGGGGGCCAT GTCTTTGGAC CAGATGCTCT CGAACCGGGA TGAGATCAAC AGTAAACTGC TTGGGGTGAT TGACCAAGCC ACCGATCCCT GGGGGGTCAA AGTGACCCGT GTGGAGATTA AGGATCTTGA ACCACCCATG GATTTGGTGG AGGCCATGAG TATGCAGATG AAGGCTGAAC GGACCAAGCG TGCCCAGATT TTGGAGGCAG AAGGCTACCG TCAAGCGGCC ATTTTGCAAG CAGAAGGGGA GAAACAGGGG GCGATTTTAA AAGCCGAGGG CGACCGCGAA GCAGCCTTTC GCCAAGCCGA GGCCCGTGAG CGCTTGGCCG AGGCCGAGGC CAACGCCACC CGCATGGTTT CGGATGCGGT AAAGGATGGC AATGTGCAGG CACTGAACTA TTTTGTCGCC ACCAAATATA CCGATGCTTT GCAGAACATG GCCAGTGCGC AAAACAGCAA GGTCATTATG ATGCCATTGG AGGCCTCTTC TATTCTGGGT TCTTTGGCGG GCATTAGCGA GTTGGCTCGA CTTACCAAGG GAGAGTAA
|
Protein sequence | MIGGFSLFSL VLLMVIVLLI FMGVKTVPQG YHYTVERFGK FTKILRPGLN FITPFLDAVT HKINMREQVL DIDAQSVISS DNAVVQADGV VFYQIVDAAR SSYEISDLHL AMRNLCMTNI RSVLGAMSLD QMLSNRDEIN SKLLGVIDQA TDPWGVKVTR VEIKDLEPPM DLVEAMSMQM KAERTKRAQI LEAEGYRQAA ILQAEGEKQG AILKAEGDRE AAFRQAEARE RLAEAEANAT RMVSDAVKDG NVQALNYFVA TKYTDALQNM ASAQNSKVIM MPLEASSILG SLAGISELAR LTKGE
|
| |