Gene Mmc1_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1446 
Symbol 
ID4480622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1758814 
End bp1759731 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content52% 
IMG OID639722187 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_865361 
Protein GI117924744 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0162555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.124024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCG GATTTTCCCT TTTTAGTCTG GTTTTATTAA TGGTCATTGT GCTGTTGATT 
TTCATGGGGG TAAAGACCGT GCCCCAAGGG TATCACTATA CGGTGGAACG GTTTGGTAAG
TTTACCAAAA TTTTACGTCC GGGGCTTAAT TTTATCACAC CGTTTTTGGA TGCCGTAACC
CACAAGATCA ACATGCGTGA GCAGGTGTTG GATATTGATG CACAGAGTGT CATCTCCAGC
GACAATGCGG TGGTACAGGC TGATGGTGTG GTCTTTTATC AAATTGTGGA TGCCGCCCGT
TCCAGCTACG AGATCAGCGA TCTCCACTTG GCCATGCGCA ACCTTTGCAT GACCAATATT
CGTTCGGTGT TGGGGGCCAT GTCTTTGGAC CAGATGCTCT CGAACCGGGA TGAGATCAAC
AGTAAACTGC TTGGGGTGAT TGACCAAGCC ACCGATCCCT GGGGGGTCAA AGTGACCCGT
GTGGAGATTA AGGATCTTGA ACCACCCATG GATTTGGTGG AGGCCATGAG TATGCAGATG
AAGGCTGAAC GGACCAAGCG TGCCCAGATT TTGGAGGCAG AAGGCTACCG TCAAGCGGCC
ATTTTGCAAG CAGAAGGGGA GAAACAGGGG GCGATTTTAA AAGCCGAGGG CGACCGCGAA
GCAGCCTTTC GCCAAGCCGA GGCCCGTGAG CGCTTGGCCG AGGCCGAGGC CAACGCCACC
CGCATGGTTT CGGATGCGGT AAAGGATGGC AATGTGCAGG CACTGAACTA TTTTGTCGCC
ACCAAATATA CCGATGCTTT GCAGAACATG GCCAGTGCGC AAAACAGCAA GGTCATTATG
ATGCCATTGG AGGCCTCTTC TATTCTGGGT TCTTTGGCGG GCATTAGCGA GTTGGCTCGA
CTTACCAAGG GAGAGTAA
 
Protein sequence
MIGGFSLFSL VLLMVIVLLI FMGVKTVPQG YHYTVERFGK FTKILRPGLN FITPFLDAVT 
HKINMREQVL DIDAQSVISS DNAVVQADGV VFYQIVDAAR SSYEISDLHL AMRNLCMTNI
RSVLGAMSLD QMLSNRDEIN SKLLGVIDQA TDPWGVKVTR VEIKDLEPPM DLVEAMSMQM
KAERTKRAQI LEAEGYRQAA ILQAEGEKQG AILKAEGDRE AAFRQAEARE RLAEAEANAT
RMVSDAVKDG NVQALNYFVA TKYTDALQNM ASAQNSKVIM MPLEASSILG SLAGISELAR
LTKGE