| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1442 |
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| Symbol | |
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| ID | 4480619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1754636 |
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| End bp | 1756453 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722185 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_865359 |
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| Protein GI | 117924742 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.514441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.157684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCTT ACGCCACCAG CTCCGACCCC GCTTTGACGC TGCTGCAAGA GATCTTTGGT
TATCCCGAAT TTCGCGGTTT TCAGCGTGAG GTGATTGATC TGGTTACGGG GGGCGGTGAT
GCCCTGGTGC TTATGCCCAC CGGGGGAGGA AAATCCCTTA CCTTTCAGAT CCCCGCCATG
TTGCGCCAGG GCATTGGCGT GGTGGTTTCG CCGCTGATTG CTTTGATGCA GGATCAGGTG
GCGGCGCTCA AACAGGCTGG GGTAAGGGCG GCCTGTCTCA ACAGTACGGT GGAGGCCCCC
GAGGCCACCG AGATTTTTCG GCAGATCTAC CAGGGTGAAT TGGATCTGCT CTATATGGCC
CCCGAGCGGT TGTTATTGCC GGGCACCCTC GCCATGCTGG ATCAACTGCC CATCGCGCTG
TTTGCCATTG ATGAAGCCCA CTGTGTCTCC CAATGGGGGC ACGATTTTCG TCCCCACTAT
TTAGGGCTCT CACAACTGGC AGAGCGCTTT CCCCGTGTGC CCCGCATTGC CCTGACCGCC
ACCGCCGATG AACGGACCCG CCAAGAGATT ATCAAACGGC TCAATTTGCA AAGTGCGCGG
CTGTTTGTGG CCAGTTTTGA CCGCCCCAAT ATTCGTTACC GGGTACTGCC CAAAGAGAAT
GGCAAACAGC AGATTAAGCG TTTTTTAGAG CAGGAGCATA AGGGGGACAG TGGCATTATC
TACTGCCTAT CGCGCAAGCG CACCGAGGAG GTGGCGGCGT GGTTGAATGG GGAGGGTTTT
ACCGCCGTGC CCTACCATGC GGGCTTGCCC CATGAGCAGC GGGAGCGGAA CCAGCAGCGC
TTTTTGTTAG AAGATAATTT GATCATCTGC GCCACCATCG CCTTTGGTAT GGGGATCGAC
AAGCCGGATG TGCGTTTTGT GGCACACTTG GACCTGCCCA AGAGCATTGA GTCCTACTAT
CAGGAGACGG GCCGGGCCGG GCGGGATGGC CTGCCCGCCA ACGCCTTTAT GGTGTTTGGT
TATGAGGATG TGGCGAAGCT GCACTGGTTT ATGGATCAGT CCGAGGCAGA ACCCGCCTTC
AAAGAGATTG AGCGGCAAAA GCTTGATAGT CTGCTGGCCT TTTGCGAGAC CACGGAGTGC
CGCCGTAAGA CGCTGCTCAA CTATTTTGGT GAGGCGCGGG AGACGCGCTG CGGCAACTGC
GACATCTGCC TGGACCCGGT AAAAACCTGG GACGGCAGAG AGGCGGCGCA GATGGCGCTC
TCGTGTGTGT TTCGCACCGG TCAAGATTAC GCCATGAGCT ATTTGAGTCA GATCTTGGTG
GGGGAGGCAG ACGAGCGCAT TGAGCGTAAT GGACACCACC GCATCAGTAC CTTTGGTATT
GGAAAAAAGC ATGCCAAAAA TGAGTGGATG GATATTTATA AGCAGCTTAT TTTTAAAGGA
TATTTGCGAG TGGTTGGGGA GTATCGCACC CTAAAGCTGG CGCAGTCGTG TCGTCCGGTG
TTGCGGGGTG AGGTGGAGGT GCGTTTGCGG ACCAAGAGCC GTAAGGTTAA AAAGGTCTTC
AAGCGCCGTT ATGAGACCGC CTTTACCACC CATAACGACC AGCAGCTATG GGATGCCCTG
GTACGGTGGC GGCGCGAGAC AGCCAGTGCT CAGGGGGTTC CTCCCTATAT TATTTTTGGC
AATGCCACCC TGGAAGCGGT GGTGGAGAGC CGCCCCCGCA GTCGCAGCCA GTTACACCAA
CTACCGGGCA TTGGCACCCA TAAAATGGAG CTCTACGGCG AAGAGCTGCT GGAACTGGTG
GCCGAATACG CCGCATAA
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| Protein sequence | MSPYATSSDP ALTLLQEIFG YPEFRGFQRE VIDLVTGGGD ALVLMPTGGG KSLTFQIPAM
LRQGIGVVVS PLIALMQDQV AALKQAGVRA ACLNSTVEAP EATEIFRQIY QGELDLLYMA
PERLLLPGTL AMLDQLPIAL FAIDEAHCVS QWGHDFRPHY LGLSQLAERF PRVPRIALTA
TADERTRQEI IKRLNLQSAR LFVASFDRPN IRYRVLPKEN GKQQIKRFLE QEHKGDSGII
YCLSRKRTEE VAAWLNGEGF TAVPYHAGLP HEQRERNQQR FLLEDNLIIC ATIAFGMGID
KPDVRFVAHL DLPKSIESYY QETGRAGRDG LPANAFMVFG YEDVAKLHWF MDQSEAEPAF
KEIERQKLDS LLAFCETTEC RRKTLLNYFG EARETRCGNC DICLDPVKTW DGREAAQMAL
SCVFRTGQDY AMSYLSQILV GEADERIERN GHHRISTFGI GKKHAKNEWM DIYKQLIFKG
YLRVVGEYRT LKLAQSCRPV LRGEVEVRLR TKSRKVKKVF KRRYETAFTT HNDQQLWDAL
VRWRRETASA QGVPPYIIFG NATLEAVVES RPRSRSQLHQ LPGIGTHKME LYGEELLELV
AEYAA
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