| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1441 |
|---|
| Symbol | |
|---|
| ID | 4480618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1752319 |
|---|
| End bp | 1754421 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639722184 |
|---|
| Product | glycine--tRNA ligase |
|---|
| Protein accession | YP_865358 |
|---|
| Protein GI | 117924741 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.764176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.147312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGT TTATGTGGGA AATCGGCACC GAAGAGATCC CGGCCCGTAT GTTACCGGGG
GCCATTACCG CCATGGGCGA GTTGACCCGC ACCGCCTTGC AAGAGGCTGG TTTGGGTTTT
GCCCAAGTAG AGAGCCAAGG CACCCCCCGG CGGCTGCTGG TGGTGGTGCA TGGTCTACAC
GACAAACAGG CTGATGTGCA GGAAGAGCGG CGTGGTCCCG CCCTACAAGC CGCCTTTGAT
AGCGACGGCA ACCCCACCAA GGCGGCGCAG GGCTTTGCCC GGGGCTGTGG GGTGGATGTG
GATCAACTAA GCCGGGTTGA GACCCCAAAG GGAACCTATC TGAGCTATAC CCTCAAGCAA
GCGGGCAAGG GGGCTAGCGA GGTGCTGCCG GGGATTATGC AGCAGGTGTT TAAAGCCTTG
CCGTGGCCAA AAACCATGCG CTGGAGTGAT GGTGAGAGCC GCTTTGTGCG CCCTGTGCAG
AGTGTGACCG CCCTGTTAAA CGGTCAACAG GTGGCGGTGG AGCTGGCCGA GAATGTGCGT
TATACCGATG CCGTCAGCGG CCACCGTTTT ATGGGCAAGG GTGCGGTGGT GGTGCAGGAT
TATGCCAGCT ACCAGCAGGC CATGGCCGAT GGCAAGGTGA TGCTCAAGTC CGAAGATCGC
ATGGCGACCA TCCGGGCGGG TGTGTTGGCC CAGGCGGCCA GTGTGGGTGG TGTGGTGGCA
AGCGATGAGG GGCTGGTTGC AGAAAATGCC TCGTTGACCG AGTGGCCGGT GGCGCTGCTG
GGGCGCTTTG ATGAGCGCTA TCTGGAGATT CCCCCCGAGG TGTTGACCAC CTCCATGCGC
TATCACCAAA AATATTTCCC GGTGTTGGAT GCCCAGGGTG GCTTGAAACC CCATTTTGTG
GTGATCGCCA ACATGGAGAC CGAGGATCAA ACGGTGTTGG TGCGGGGCTA TCAGCGGGTG
CTCAAGGCGC GGCTTGAAGA TGCAGCCTTT TTCTGGGCAG AAGATCGCAA GATACGGCTG
ACCGATCGCC TACCCGATCT CCAAGCGGTG GTGTGGCAGG CCAAGCTGGG TTCGCTGTTT
CAAAAATCCC AACGCATGGC GCATCTAGCC AGCGCCATCG CCGCACGGGT GGCCCCGCAA
CAGGCGGCTT TGGCCGAGAA GGCGGGATTG TACAGTAAGT GCGATCTGGT GACGGGCATG
GTGGGGGAGT TCCCTGAGTT GCAGGGCATT ATGGGTGGCT ACTATCTCCC CCGCGAGCGC
GCGCAGGATG AGGTGGTGGC GTTGGCCATT CGTGAGCACT ATATGCCTGC CGGGGCAGGG
GATGCCTTAC CCCAGAGCCT GTGCGGGCGC ATCGTCTCGT TGGCGGACAA GCTGGATACC
TTGGTAGGCT GTTTTGGCAT GGGCATTACC CCCACCGGTA CTAAAGATCC TTTTGGCCTA
CGGCGGGCGG CGTTGGGGGT GATTCGTCTG TTGCTGCAAG AGCAAGGCCT GCGGCTGCCG
CTGCGTCAGC TCTGTGAAGA GGCTTACCGT CAATATGGTG AGATTGGCCT GGAGATGGGC
GAAGCGCAGA CGGTGCAGGG GGTGCTGGCG TTTTTCTATG GGCGTCTGCA AGCCCATTTA
AAGGCGGAAG GGGTGGATTA TGACCTTATT GATGCGGTGC AGGGGCTGAA CCTGGATGAT
CTGTGGGATG CGGTTAGTCG GGTTAAGGCG CTGGTTGCTT TTAAGCAGGA TGCCGCCTAT
GAAGCGTTGG TGGCGGCCAA CAAGCGCATG GCCAATATCC TCTCTAAGGT TGAAGATAGT
GCCCTGGATT TAACGCTGGG CGTAGATGAA GCGGTGCTCA AAGCCTCTGC GGAGCAGGGG
TTGGCGGCGG CGGTGGCGGC GGTGGAAGAT CGGGTTAAAA CCCACAGCAG CAATGGGCGT
TATGCCGAAG CGCTGGGGGA GTTGGCGGCG CTGCGCGGCG TGATTGACAC CTTTTTTGAT
GAGGTGATGG TGATGGACGA AGATGACGCA GTGCGGCATA ACCGGCTACG CCTGCTTGCC
ACGGTGTTGG GGCTGTTCCG GCAGGTGGCG GATGTCTCGT GCTTGGTGGT GGCTGAAAAA
TAG
|
|---|
| Protein sequence | MAEFMWEIGT EEIPARMLPG AITAMGELTR TALQEAGLGF AQVESQGTPR RLLVVVHGLH
DKQADVQEER RGPALQAAFD SDGNPTKAAQ GFARGCGVDV DQLSRVETPK GTYLSYTLKQ
AGKGASEVLP GIMQQVFKAL PWPKTMRWSD GESRFVRPVQ SVTALLNGQQ VAVELAENVR
YTDAVSGHRF MGKGAVVVQD YASYQQAMAD GKVMLKSEDR MATIRAGVLA QAASVGGVVA
SDEGLVAENA SLTEWPVALL GRFDERYLEI PPEVLTTSMR YHQKYFPVLD AQGGLKPHFV
VIANMETEDQ TVLVRGYQRV LKARLEDAAF FWAEDRKIRL TDRLPDLQAV VWQAKLGSLF
QKSQRMAHLA SAIAARVAPQ QAALAEKAGL YSKCDLVTGM VGEFPELQGI MGGYYLPRER
AQDEVVALAI REHYMPAGAG DALPQSLCGR IVSLADKLDT LVGCFGMGIT PTGTKDPFGL
RRAALGVIRL LLQEQGLRLP LRQLCEEAYR QYGEIGLEMG EAQTVQGVLA FFYGRLQAHL
KAEGVDYDLI DAVQGLNLDD LWDAVSRVKA LVAFKQDAAY EALVAANKRM ANILSKVEDS
ALDLTLGVDE AVLKASAEQG LAAAVAAVED RVKTHSSNGR YAEALGELAA LRGVIDTFFD
EVMVMDEDDA VRHNRLRLLA TVLGLFRQVA DVSCLVVAEK
|
|---|
| |