| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1431 |
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| Symbol | |
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| ID | 4480660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1738420 |
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| End bp | 1740873 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722174 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_865348 |
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| Protein GI | 117924731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.726695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGG CACTTTTCAG GTCAATTTCT ATGGTGTTGG GCCTGCTAAG CTTGCTCTGC
ATAAACACGG TTGCGCACGC ATCCCCTAGC CTAGAAGCCC TTTATGAAAA GGGGTTCGCC
TACCAAAAGG GACGCGGTGT AGAGATCGAC CCCCTTACCG CCCGCGACTA TTATATGGAT
GCCGCCAACC AGGGCCACTG GAAAGCCCAA TATGCTTTGG GCTGGATGTA CCTAAATGGC
GATGGTCTAA CCCAGGACAG TGCCGAGGCC AAAAAATGGC TGAGCATGGC GGCCAAGCAG
GGGGATGGAC GAGCCCAATA TGCCTTGGGC CAGTTGCTAC GCACCGCCCC CCCGCCACTG
GGGGATCAAA AACAAGGGTT AGATTGGGTG CAACGCGCGG CCAAAAGCGG CTTTGCCCAA
GCGCAGTATC AGCTTGGCAT GATCTATCTA CAAGGAAATG GTGTAACCGT AGACACCAGC
CAGGCTTGGC ATTGGCTGAC CCAGGCCGAA AAGGGCGGCG TACACAAAGC AGGTGAGGTA
TTAAGCCATT TTAGCCGGTT TACCATCGCC CGTGCCCAAC AACAACAGGC TCAAGCCAGC
CCCCCCCAAA CAACCGCTCC AGCAAGCCCC AGCCCTGCTG ACCAGCAAGC TGTGACAGCA
AGCGCTCTCC ACGCCAATCC GGCACCCATC CGCTTAGGGG AAAACCCCAC AACCCTGAGC
TATAGGGTCA TCCCTGGCCC AGGGGGTGAT CTAACCCGTA GTGTGCGCCT TATCTATGAC
GCGGCCACCG GCGAAGCAAT CCCTCTCTAC GAAGCACCAA AAGCCCGTAG TCAAGGGGCG
CTTGTGGCGT GGAACCGACA CTTTACCCAC CTGCAAAGCA CTTATGATTC GGTTTTGCAA
GACCCCGCTG CGGATCCCCG CGCCGACCAA TATGTTCGGC GTATCCAGGC CAACTTGCTC
GCCCCTGATA CCCTTGACAA GATTAAAGAA GCGGTGGAGT TGGCGGTATT AACGCTGGAG
AGCGGCGGCA TTTTTGATCC CGGCTGGCTC GCCACCCTCA CCCCCGCATT ACAACCGGAC
GATGCCCGGC AGGATGTGGA TCAAGCGTTG CTCAGCCTAA CCGAGTTGGA GAGCCCCGCT
GCCCACTATA TCTACGGCAT GCGTTTACTG GCCCGCCATG CGCTAACCCA GGCCCAACAC
CACCTGCAAC AGTCCGCTGA GTTGGGTTTT GTCCATGCCC AGCACGCCCT GTTTGAGTAT
TACATGAACC CCACCCCCAA CCAGAGCAAC CGTTTTCAGG CCCGCTACTG GGGGGAACAA
GCAGCCTCGC TTGGTTTGGT TAAAAGCCAG ATTATGCTGG GTTTTTCACT GCTTAGCGGC
TCTGTACTCA ACCAAGATTT AGAGGGCGCG TTGCACTGGC TGCATCAAGC CAGCAAGCGC
TTTCCTGCCA TCACCGTGTG GGATTGGACC CTCAATCCAG CGGGCCGCAC CTTTACTGAA
TCGGAACCCC TGCTCAAACA GACCATCCAC TGGTTTCAGC ACAATCGTTA TGAACAGGTT
ACCCCGGCCA ACCTGTTACT GGCACAGTTC CTTAACCGGG CCTACACCAA AGATTTAGAA
GACACCTTGG CCACTGTGGT GGATGGGGCG CAGGGAACGT TTAAGCCCAT CACCTCGCGC
TTTACCTTTG AGCGTAAGCT GGATGATTTT ATCAAAGCCA TCTGGCGTGC CCACCATGAT
GATCCCGTCG CCACGCAGGA GGCCCAACAG CTTTACAAGC AAGTCATCAG CTACCCCCTA
CCCGAAAGCT ATCTTGAACA GTTGCAGCAG GCGGCGAGCC AAGAGAATGC CCTGGCACAG
ACACGCTGGG CCTTTATGCA CCTTATGGGC CTGGGCGTCA CCCCAAACCG CCCTATGGCG
CTCTACTGGT TCTATCGGGC AGCCCGTCAG GGGCGTCACG TCGAATTTGC CACCGCCCAG
GCTTACCTCT CATTTCTGGC CTTGCAGCAA CCCAAAAATG AGACCCGCTG GTTCCGCGCC
CTACAATGGA TGAACCGCGC CAAGGATTGG GACTATATTG CCGCCATGCA ATACCTTGCC
CGCTTTGGTT TTGGCAAACA AGTACGCACC ATTAAGCTAC CCAGCGCCAC CTCTGAACCG
CGCCAAGGCC CCTACCCCAA CGCGCATGCC ACCCTCTTGG CTGGGCTCAT GCGCTTGCCA
CCCTTGGCAC AGGGGGACGA GGCGCTAAAG GGGATTGAAC TTATCCAACT GGCCGCTCAA
GCTGAAGAGC CCGCCGCACT CTTTTTCCTG GGGCAGTTGT ATCTGGAAGG CGCCCATTTG
GCCAAAAATC TTGACCGTGC CACACACCTG CAACTTAGGG CGTTGGAGCT TGGCTATCAC
GCCGCTCCGC TCTCCTACAC TGAACTCTCA CTTGAGCTAC TTGGAAACCC ATGA
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| Protein sequence | MTMALFRSIS MVLGLLSLLC INTVAHASPS LEALYEKGFA YQKGRGVEID PLTARDYYMD
AANQGHWKAQ YALGWMYLNG DGLTQDSAEA KKWLSMAAKQ GDGRAQYALG QLLRTAPPPL
GDQKQGLDWV QRAAKSGFAQ AQYQLGMIYL QGNGVTVDTS QAWHWLTQAE KGGVHKAGEV
LSHFSRFTIA RAQQQQAQAS PPQTTAPASP SPADQQAVTA SALHANPAPI RLGENPTTLS
YRVIPGPGGD LTRSVRLIYD AATGEAIPLY EAPKARSQGA LVAWNRHFTH LQSTYDSVLQ
DPAADPRADQ YVRRIQANLL APDTLDKIKE AVELAVLTLE SGGIFDPGWL ATLTPALQPD
DARQDVDQAL LSLTELESPA AHYIYGMRLL ARHALTQAQH HLQQSAELGF VHAQHALFEY
YMNPTPNQSN RFQARYWGEQ AASLGLVKSQ IMLGFSLLSG SVLNQDLEGA LHWLHQASKR
FPAITVWDWT LNPAGRTFTE SEPLLKQTIH WFQHNRYEQV TPANLLLAQF LNRAYTKDLE
DTLATVVDGA QGTFKPITSR FTFERKLDDF IKAIWRAHHD DPVATQEAQQ LYKQVISYPL
PESYLEQLQQ AASQENALAQ TRWAFMHLMG LGVTPNRPMA LYWFYRAARQ GRHVEFATAQ
AYLSFLALQQ PKNETRWFRA LQWMNRAKDW DYIAAMQYLA RFGFGKQVRT IKLPSATSEP
RQGPYPNAHA TLLAGLMRLP PLAQGDEALK GIELIQLAAQ AEEPAALFFL GQLYLEGAHL
AKNLDRATHL QLRALELGYH AAPLSYTELS LELLGNP
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