Gene Mmc1_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1409 
Symbol 
ID4482628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1708949 
End bp1710790 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content57% 
IMG OID639722152 
Productcitrate transporter 
Protein accessionYP_865326 
Protein GI117924709 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000118186 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTAG AGATGCTCAT GGTGTTCGGT TTGTTAGGGG TCACAGTGGT GCTGTTTGCC 
AGTGATCGGG TGCGTCTGGA TGTGGTGGCA ATCGGGGTGA TGCTGGTGTT GGGCGTCAGT
GGGGTAGTGA CCATGCAGGA GGCGCTGGCG GGTTTTGGCA ACCCGGTGGT GGTGTTGATT
GCGGCGCTGT TTGTGGTGGG GGAAGGTCTG TTCAAAACCG GTATTGCTTA CGATGCAGGC
AACCGCTTGA TGCAGGTAGC GGGGAACCAT CCGGTGCGGT TAATGTTGCT GTTAATGGTG
GCGGTGGCCA TCTTGTCGGC CTTTATGAGT TCCACCGGCG CGGTGGCGAT TTTTATGCCC
GTGGCCATGG GCCTAGCGGC AAAGGGGGAT ATCGCGCCCT CACGGTTATT AATCCCCTTG
GCCTTTGGCT CGCTGATTGG CGGCATGCTT ACGCTGATTG GCACGCCCCC CAACATGGTC
GCCAGTCAGG CCCTGGTGCA TGCGGGTTTA AAGCCATTTG GCTTTTTTGA ATTTACCCCC
ATTGGTCTGG CGGTGCTGGT GGTCACGATG CTCTACATGG TGGTGGCCGG GCGTTTTTTA
CTGCCCGACC GGCGGCTGGC CCGCAGCGAA GAGCAGAGTG AACGTCAAAC CCGACGGGAG
ATGGCCGAGG GCTATCAAGT GCGCAGCCGC ATGAAGCGGA TGCAGGTGGA GCCCGGTTCA
GCATTGATTG GACAGTCGGT CTCGGAGGTG CATTTTCGCA CCCGCTACAA CTGCACCCTC
ATGGGCATTG AGCGTGCTGG GCGGTTTGGT CACATGCGGT TTTTGCCCGC GCTCTCGCAT
ACCCCATTGA TGCAGGGCGA CCAACTCTAC ATGGTCTGCA ACAACCCTGA TCAGATGGGG
TTGGTAGAGC AGCAGCAGGG GTTACGCGCC TTGCCCATGC AGGAACAACA CATTACCCAT
ATGGCTTTGG CTTTGGGCAT TGCCGAGGTG TTGATCCCGC CGGGGTCGCG TATCAATGGT
AAATCATTGG CAGAAGTGCA ATTTCGTAAG CGCTATGGCT TGAGTGTGTT GGGGGTCAAA
CGGTTGGGTG TGGCACTGCC AGCCCCGAGC AGTGAAACCG TGTTGCAGTG TGGCGACGCC
CTTTTGGTAG GGGGCAATTG GTCGCAGCTC CAGTTGTTAG GTGTGCGGGG CAAAGATTTT
ATGGTGATGA GCCTGCCCAA AGAGGTGGAT GAGGTGGTCC CCGCGCGGGA GCGTTCCTGG
ATCGCGTTGG CCATTGTGGC ATTGATGCTG GTCGCCTTGG GTTTAAAACT CTTACCCACC
GTGGCAACCG TCATGTTGGC CGCCGTGGCC ATGGTGATGC TACGCTGTTT AACCATGGAG
GAGGCTTATC AATCCATCCG CTGGGAGTCG CTGATTCTCA TCGCCGGTAT GCTGCCCATG
GCCACCGCCT TGCAAAAAAG TGGTGGGGCC GAGTTGATCG TGGGGTTGTT GCTCGATGGA
GTGGGAGATA TGAGCCCTAT GGTTATGATG GCGGGTCTGT TTTTAATCAC CACCCTGTTT
AGCCAGTTTA TCTCCAACAC CGCCACCACA GTGTTGATTG CCCCCATCGC CATTGGTGCC
GCACAGGGGC TAGCGGTTTC GCCCTATCCC CTCTTGATGA CCGTTGCCAT TGCGGCCTCC
ACGGCCTTTG CAACCCCCGT CGCTTCCCCC GTCAACACCT TGGTGCTGGG GCCGGGCAAC
TATCGCTTTA ATGACTTTGT TAAGATTGGT GTGCCCTTGC AGGTGTTGGT GATGGTGGTC
ACGCTGCTCT GTGTGCCACT ATTTTTTCCA TTCACCCCCT AA
 
Protein sequence
MNLEMLMVFG LLGVTVVLFA SDRVRLDVVA IGVMLVLGVS GVVTMQEALA GFGNPVVVLI 
AALFVVGEGL FKTGIAYDAG NRLMQVAGNH PVRLMLLLMV AVAILSAFMS STGAVAIFMP
VAMGLAAKGD IAPSRLLIPL AFGSLIGGML TLIGTPPNMV ASQALVHAGL KPFGFFEFTP
IGLAVLVVTM LYMVVAGRFL LPDRRLARSE EQSERQTRRE MAEGYQVRSR MKRMQVEPGS
ALIGQSVSEV HFRTRYNCTL MGIERAGRFG HMRFLPALSH TPLMQGDQLY MVCNNPDQMG
LVEQQQGLRA LPMQEQHITH MALALGIAEV LIPPGSRING KSLAEVQFRK RYGLSVLGVK
RLGVALPAPS SETVLQCGDA LLVGGNWSQL QLLGVRGKDF MVMSLPKEVD EVVPARERSW
IALAIVALML VALGLKLLPT VATVMLAAVA MVMLRCLTME EAYQSIRWES LILIAGMLPM
ATALQKSGGA ELIVGLLLDG VGDMSPMVMM AGLFLITTLF SQFISNTATT VLIAPIAIGA
AQGLAVSPYP LLMTVAIAAS TAFATPVASP VNTLVLGPGN YRFNDFVKIG VPLQVLVMVV
TLLCVPLFFP FTP