Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1409 |
Symbol | |
ID | 4482628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1708949 |
End bp | 1710790 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639722152 |
Product | citrate transporter |
Protein accession | YP_865326 |
Protein GI | 117924709 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000118186 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTTAG AGATGCTCAT GGTGTTCGGT TTGTTAGGGG TCACAGTGGT GCTGTTTGCC AGTGATCGGG TGCGTCTGGA TGTGGTGGCA ATCGGGGTGA TGCTGGTGTT GGGCGTCAGT GGGGTAGTGA CCATGCAGGA GGCGCTGGCG GGTTTTGGCA ACCCGGTGGT GGTGTTGATT GCGGCGCTGT TTGTGGTGGG GGAAGGTCTG TTCAAAACCG GTATTGCTTA CGATGCAGGC AACCGCTTGA TGCAGGTAGC GGGGAACCAT CCGGTGCGGT TAATGTTGCT GTTAATGGTG GCGGTGGCCA TCTTGTCGGC CTTTATGAGT TCCACCGGCG CGGTGGCGAT TTTTATGCCC GTGGCCATGG GCCTAGCGGC AAAGGGGGAT ATCGCGCCCT CACGGTTATT AATCCCCTTG GCCTTTGGCT CGCTGATTGG CGGCATGCTT ACGCTGATTG GCACGCCCCC CAACATGGTC GCCAGTCAGG CCCTGGTGCA TGCGGGTTTA AAGCCATTTG GCTTTTTTGA ATTTACCCCC ATTGGTCTGG CGGTGCTGGT GGTCACGATG CTCTACATGG TGGTGGCCGG GCGTTTTTTA CTGCCCGACC GGCGGCTGGC CCGCAGCGAA GAGCAGAGTG AACGTCAAAC CCGACGGGAG ATGGCCGAGG GCTATCAAGT GCGCAGCCGC ATGAAGCGGA TGCAGGTGGA GCCCGGTTCA GCATTGATTG GACAGTCGGT CTCGGAGGTG CATTTTCGCA CCCGCTACAA CTGCACCCTC ATGGGCATTG AGCGTGCTGG GCGGTTTGGT CACATGCGGT TTTTGCCCGC GCTCTCGCAT ACCCCATTGA TGCAGGGCGA CCAACTCTAC ATGGTCTGCA ACAACCCTGA TCAGATGGGG TTGGTAGAGC AGCAGCAGGG GTTACGCGCC TTGCCCATGC AGGAACAACA CATTACCCAT ATGGCTTTGG CTTTGGGCAT TGCCGAGGTG TTGATCCCGC CGGGGTCGCG TATCAATGGT AAATCATTGG CAGAAGTGCA ATTTCGTAAG CGCTATGGCT TGAGTGTGTT GGGGGTCAAA CGGTTGGGTG TGGCACTGCC AGCCCCGAGC AGTGAAACCG TGTTGCAGTG TGGCGACGCC CTTTTGGTAG GGGGCAATTG GTCGCAGCTC CAGTTGTTAG GTGTGCGGGG CAAAGATTTT ATGGTGATGA GCCTGCCCAA AGAGGTGGAT GAGGTGGTCC CCGCGCGGGA GCGTTCCTGG ATCGCGTTGG CCATTGTGGC ATTGATGCTG GTCGCCTTGG GTTTAAAACT CTTACCCACC GTGGCAACCG TCATGTTGGC CGCCGTGGCC ATGGTGATGC TACGCTGTTT AACCATGGAG GAGGCTTATC AATCCATCCG CTGGGAGTCG CTGATTCTCA TCGCCGGTAT GCTGCCCATG GCCACCGCCT TGCAAAAAAG TGGTGGGGCC GAGTTGATCG TGGGGTTGTT GCTCGATGGA GTGGGAGATA TGAGCCCTAT GGTTATGATG GCGGGTCTGT TTTTAATCAC CACCCTGTTT AGCCAGTTTA TCTCCAACAC CGCCACCACA GTGTTGATTG CCCCCATCGC CATTGGTGCC GCACAGGGGC TAGCGGTTTC GCCCTATCCC CTCTTGATGA CCGTTGCCAT TGCGGCCTCC ACGGCCTTTG CAACCCCCGT CGCTTCCCCC GTCAACACCT TGGTGCTGGG GCCGGGCAAC TATCGCTTTA ATGACTTTGT TAAGATTGGT GTGCCCTTGC AGGTGTTGGT GATGGTGGTC ACGCTGCTCT GTGTGCCACT ATTTTTTCCA TTCACCCCCT AA
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Protein sequence | MNLEMLMVFG LLGVTVVLFA SDRVRLDVVA IGVMLVLGVS GVVTMQEALA GFGNPVVVLI AALFVVGEGL FKTGIAYDAG NRLMQVAGNH PVRLMLLLMV AVAILSAFMS STGAVAIFMP VAMGLAAKGD IAPSRLLIPL AFGSLIGGML TLIGTPPNMV ASQALVHAGL KPFGFFEFTP IGLAVLVVTM LYMVVAGRFL LPDRRLARSE EQSERQTRRE MAEGYQVRSR MKRMQVEPGS ALIGQSVSEV HFRTRYNCTL MGIERAGRFG HMRFLPALSH TPLMQGDQLY MVCNNPDQMG LVEQQQGLRA LPMQEQHITH MALALGIAEV LIPPGSRING KSLAEVQFRK RYGLSVLGVK RLGVALPAPS SETVLQCGDA LLVGGNWSQL QLLGVRGKDF MVMSLPKEVD EVVPARERSW IALAIVALML VALGLKLLPT VATVMLAAVA MVMLRCLTME EAYQSIRWES LILIAGMLPM ATALQKSGGA ELIVGLLLDG VGDMSPMVMM AGLFLITTLF SQFISNTATT VLIAPIAIGA AQGLAVSPYP LLMTVAIAAS TAFATPVASP VNTLVLGPGN YRFNDFVKIG VPLQVLVMVV TLLCVPLFFP FTP
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