| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1392 |
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| Symbol | |
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| ID | 4481811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1691829 |
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| End bp | 1694000 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722135 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_865309 |
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| Protein GI | 117924692 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGG ACCCTCAACA GATCCAGGAA CTGCAATCTG GTTTCTCCGC TGATCCCTTT
GCCGTGCTCG GTCGCCACGA CCAGCCCGAT GGACAGGTGG CCGTCACTGT GCTCAGCCCC
CGCACAGAGC GGCTATTTTT AACCAATATC GGTCAGGAAA TGACGCGCAT ACCGGACAGC
GATCTGTTCC ATTGGTGTGG TGATGGACGC GCACTGCCCT ACCATTATCG TTTGCGCCGA
GTGGATGCCC ACGGCAGCCA AACCGAATTT CATGACCCCT ACAGCATGCC ACCGATGATT
GGTGATCTGG ACCGCCATCT CTTTAATGAG GGCACCCACC ACCATGCCGG CCAGTTTTTA
GGCGCTCACC GTATGGAGGT GGAGGGCATT CGTGGGGTCT GTTTTGCCGT TTGGGCCCCC
AATGCCCAAC GGGTAAGTGT GGTGGGGGAT TTCAACCAAT GGGATGGCCG TATCCACCCC
ATGCGCCTGC ACCAAGATAG CGGCATTTGG GAGATCTTTA TCCCCGCGCT GAAACGGGGC
GAACATTATA AATATGAAAT TCGTACCACC AACGGTGCCT TGCTGCTCAA AAGCGACCCC
TACGGCCATG CTCATCAACT ACGCCCAGAA AATGCCTCGA TCATCACAGA ACCGAGCAAC
TACCCCTGGC ATGATGAGGT GTGGATGCGT GCTCGCAGCC GCTTTAATTG GCAAAAAAAA
CCCATTAGCA TTTACGAGGT ACACTTAGGT TCCTGGCTCG ATGCTGCCAC GGACCCCTTT
CCCAACTATC GGGAGCTCGG CAAACGCTTG GCCCGCTACT GTAGCGAAAT GGGCTTTACC
CATGTGGAAC TGATGCCCAT CAATGAACAC CCCTTTGATG GCTCCTGGGG CTACCAAAGT
ACCGGTTATT TTGCCGTCAC CTCCCGCTTT GGCGATGGGG ATGATTTTCG CGCTATGGTG
GACCAACTGC ACGGCGCCAA TATTGGGGTT ATCCTAGACT GGGTGCCGGC GCATTTTCCT
AAAGATGCCC ACGGTTTGGG GCAGTTTGAT GGCACAGCCC TGTATGAACA TCAAGACCCC
CGCCTTGGGG AGCATCAGGA TTGGGATACG CTGATTTTTA ATTTTGGCCG TCTTGAGGTC
AAATCTTTCC TTATATCCAG CGCCCTACAC ATGCTCACCC GCTACCATCT GGATGGTCTA
CGGGTCGATG CCGTAGCCTC CATGCTCTAC CTGGACTACT CCCGCGAGGA TTGGTTGCCC
AACAAATATG GTGGCCGGGA AAATCTGGAA GCGATCACCT TTTTACGCGA ACTTAACCAG
GCGGTTCACC ATGACTGCCC CGGCGTGTTG ATGATCGCTG AAGAGTCCAC AGCTTGGCCA
CAAGTTACCC GTCCCCCTGA GTTGGGCGGA TTGGGTTTTA ACATGAAGTG GAATATGGGC
TGGATGAACG ATACCTTGAG CTATTTCAGC AAGGATCCCA TCCACCGAAA ATATCACCAT
GATAATCTGA CCTTCAGCCT TTATTATGCG TTTTCAGAAA ACTTCACCCT GCCTTTTTCC
CATGATGAGG TGGTACACGG CAAAGCCTCT ATGCTGGGCA AAATGCCGGG GGATGAGTGG
CAGCGGTTTG CTAACCTGCG CCTTCTTTAC ACCTACATGT TTACCCATCC GGGGAAAAAG
CTGCTGTTTA TGGGATGCGA ATTTGGTCAA AGCCAGGAGT GGAACTTTAG CCAAGCCCTA
CCGTGGGAAC TGCTGGAGCA CACTTTTCAC AAGGGTTTAC AACAACTGGT CAAGGATCTT
AACCTGCTCT ATTGCAAGGA AACCGCCCTG CACGAGCGGG ACTTCACCCC CGATGGCTTT
CAGTGGATCG ACTGTCACGA CAGTGACCAA TCCATTATTA GCTTTCAGCG TAAATCCAGC
GAGGGTGAGG TGGTGGTACT GCTCAACTTT ACCCCCATCC CCCGAGACAA TTATCGCATC
GGCGTACCCC GCCCAGGTCT TTATAAAGAG ATCTTCAATG CCGACTCAGG CCACTATGGG
GGCAGCAACT ATGGCAATGG TATGAGCCAG TTACTAACCG AACCCTACCC TTGGATGAAC
CAGCTTCAAT CGTTGGTGCT TAATGTTCCC CCTATGGCGG GAATTATCCT ACGCTGTGAG
CAAGAAGGGT AA
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| Protein sequence | MNLDPQQIQE LQSGFSADPF AVLGRHDQPD GQVAVTVLSP RTERLFLTNI GQEMTRIPDS
DLFHWCGDGR ALPYHYRLRR VDAHGSQTEF HDPYSMPPMI GDLDRHLFNE GTHHHAGQFL
GAHRMEVEGI RGVCFAVWAP NAQRVSVVGD FNQWDGRIHP MRLHQDSGIW EIFIPALKRG
EHYKYEIRTT NGALLLKSDP YGHAHQLRPE NASIITEPSN YPWHDEVWMR ARSRFNWQKK
PISIYEVHLG SWLDAATDPF PNYRELGKRL ARYCSEMGFT HVELMPINEH PFDGSWGYQS
TGYFAVTSRF GDGDDFRAMV DQLHGANIGV ILDWVPAHFP KDAHGLGQFD GTALYEHQDP
RLGEHQDWDT LIFNFGRLEV KSFLISSALH MLTRYHLDGL RVDAVASMLY LDYSREDWLP
NKYGGRENLE AITFLRELNQ AVHHDCPGVL MIAEESTAWP QVTRPPELGG LGFNMKWNMG
WMNDTLSYFS KDPIHRKYHH DNLTFSLYYA FSENFTLPFS HDEVVHGKAS MLGKMPGDEW
QRFANLRLLY TYMFTHPGKK LLFMGCEFGQ SQEWNFSQAL PWELLEHTFH KGLQQLVKDL
NLLYCKETAL HERDFTPDGF QWIDCHDSDQ SIISFQRKSS EGEVVVLLNF TPIPRDNYRI
GVPRPGLYKE IFNADSGHYG GSNYGNGMSQ LLTEPYPWMN QLQSLVLNVP PMAGIILRCE
QEG
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