| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1387 |
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| Symbol | |
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| ID | 4481806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1686859 |
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| End bp | 1687821 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722130 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_865304 |
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| Protein GI | 117924687 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000243824 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CAAAATATCA AGGTGAATCA TACGATCAGC TCCACCTGTT TTATGGGGTC
GGCTATGAAT CCGTCGCTTA TGTGCTGGAA GATTGCTGGG TCTACACCAT GCAGCATGAT
GATATTATCA TCTCGCCAGA CTATCCCAAC GATGCGCTCT ATGTGCTGTT AGAGGGGCAG
GCGCGGGTCC ATTTGGGGGG AATCCAGACC GAACCCTTGT TGATTTTGGA AACCGGTTCC
TGCGTTGGTG AGCTCTCTAT CATTGATCAA GGGCGGGCGT CGGCCTATGT CCTTGCCGAG
GGTGCCACCA AACTGCTCAG CATTGATGAA AGTCGGGTAT GGTCTTTAAT TCACTCATCC
CATACCCTTG CATGTAATTT ATTGAATATA CTCTCTAAAC GTATGCGCAA TAATAATCGG
GTGATTATTG AGGGGTCGGA GCGACAGCGT AAGTTAGAAA CCTTTGCCAA GGTGGATCCC
CTCACCGGTA TCTACAACCG GCGTTGGTTT GATGAGAGCA TGCAGCGGCA GATGCGGCGG
GTCGAGCACA GCCAAAACCC GCTCTCTTTA ATCATGCTGG ATGTAGACCA CTTTAAACGC
TACAACGATA CCCACGGTCA CCAAGGGGGG GATGAGGCGC TCATTGCACT GGCGCATACC
ATCAGCCTGC ATCTACGCCC TGGTGATATT GCTGCCCGTT ACGGTGGTGA AGAGTTTGCT
GTGGTGCTGC CCGATACCGA TGCGGTATCG GGGCGTATGA TCGCCGAGCG ACTGCGTACT
GCGGTGGAGG CGCTGGAAAT TAAGGATGAT GAGGGCAACT CTCTTTCCGG CATTACCATA
TCATTAGGGG TGGCGCAAAC CAGCGGCACC GTGGATAGCG TGAGTGAACT CATCGCCACC
GCCGATGCCG CGCTCTACCA AGCCAAGAAT CAGGGCCGTA ACCGGGTGGT GGTGGGCGAC
TGA
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| Protein sequence | MKKTKYQGES YDQLHLFYGV GYESVAYVLE DCWVYTMQHD DIIISPDYPN DALYVLLEGQ
ARVHLGGIQT EPLLILETGS CVGELSIIDQ GRASAYVLAE GATKLLSIDE SRVWSLIHSS
HTLACNLLNI LSKRMRNNNR VIIEGSERQR KLETFAKVDP LTGIYNRRWF DESMQRQMRR
VEHSQNPLSL IMLDVDHFKR YNDTHGHQGG DEALIALAHT ISLHLRPGDI AARYGGEEFA
VVLPDTDAVS GRMIAERLRT AVEALEIKDD EGNSLSGITI SLGVAQTSGT VDSVSELIAT
ADAALYQAKN QGRNRVVVGD
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