Gene Mmc1_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1378 
Symbol 
ID4482473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1670785 
End bp1671258 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content53% 
IMG OID639722121 
Productputative transposase 
Protein accessionYP_865295 
Protein GI117924678 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.16406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAT CTTACCGTAG GCACGATATT TCAGACCAAC TATGGTCACG CCTTGAGCCC 
CATTTGCCTG GAAGGGCTGG AAGCTGGGGA GGTGTAGCCA AGGACAACCG CCTTTTTATC
AATGCGGTGT TTTGGATCTT GCGTACAGGT GCGCCATGGC GCGATCTTCC ACCAGATTAT
GGCGATTGGA ACAACACTCA ACGCCGTTTC TGCCGGTGGC GCGACAAAGG GATCTGGGAG
AAGCTGCTTG ACCAGATGAT TGAAGACCCT GATTACGAGT GGTTGATGAT CGATGCATCT
CACTGCAAGG TGCATCCGCA TGCAGCTGGG GCCAAAGGCG GCAATCAAGA GATGAGTCGC
ACAAAAGGGG GCTCAACAGT AAGATACATT TGGCCGTGGA TGCGCATGGT ATGCCGGTCA
GAGCGATTAT CACGAAGGGT ACCCGAGCTG ATTGCTCACA AGCTCAAGCC TTGA
 
Protein sequence
MTASYRRHDI SDQLWSRLEP HLPGRAGSWG GVAKDNRLFI NAVFWILRTG APWRDLPPDY 
GDWNNTQRRF CRWRDKGIWE KLLDQMIEDP DYEWLMIDAS HCKVHPHAAG AKGGNQEMSR
TKGGSTVRYI WPWMRMVCRS ERLSRRVPEL IAHKLKP