Gene Mmc1_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1376 
Symbol 
ID4482471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1668990 
End bp1670498 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content54% 
IMG OID639722119 
Producttransposase IS66 
Protein accessionYP_865293 
Protein GI117924676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.154743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAG TATCTAAGGA ATCTCGTGAG CGTTTGAACC GGACACCTGA TAACAGCTCC 
CAGCCGCCCA GCAGTCGTCC GGCGTACCTT GGAATTCCAG TTGAGGAGGA TGAAGCGCAT
CTGGATGAGG ATGAGGAAGA CGCTTCGCCG GATAAAAAGA AGGGGGCCAA TGATGAGGGT
GGAGATGATT CACCAGGGCC TTCCGGTAAT TCTACTCCCC CTGCTCCAGG AAAGGGCAAG
CCGGATTCTT CAAGCGAGAA GCCGAAAGGT AGGGCTGGGA AGCCGATCGG CGCCAAAGGC
TTCGGCCGTA CCCAAATAAT CCCGATTCGG AGTACCGTGG TTCATCGAGC GGAAACGTGT
GCTGCCTGCG ATGCTGCCCT TCCCTTGGAT GCTCGATTTA TAGCTCGAAT CGGCTATGTG
ACCATCGATC TGATAAGGGG TGGCCCGGAT CAGCCTGGAT TGAGGCTGGA GGGAACCAAG
CACCTTTTTG GGGAAATTGC CTGTAGATGC GGCCATATTT CATGTACCGG GCCCGGCACA
GGGGATCGAC TTGAGATTGC AGGACGCAAA ACTGCCACCA ATTTGAGTGA ATGGCGTATT
GTCGGCCCCA TGTTGGCAGC TTTCATTGTT GCGCTCGCAA AACGGATGCG GTTGTCTCGC
TCCAAGGTCC AGGAGTTTTT AATCGATTGG TTCGGCCTGG AGTTGAGTGT CGGGACCATC
GACAATTGCA TACGTGAAGT CGGGCTGGCT GCCAACCCTG TTCAGGATGA ACTGATTGCT
GAACTTCGTG CATCTGCTCT GGCTCATGTA GACGAAACGC CTTGGAAGCA AAAAGGTCAA
GCTTTGTGGC TTTGGGTTTT CGCGACGGCC AATACAGTCT TGTTTTGTGT GGGACCTCGG
ACACGGCAAA TGGTCATGGA TATCCTGACC GAGGAATTCG CGGGCTGGCT GATGAGCGAC
GGACTCATGA ACTACCGGAC TTTTTCAAAG CGGCTGCGTT GCTGGGCACA CCTGATCCGG
AAGGCCAAAG GGTTGTCGGT AAGCCTGGAT AAAGAGACCA AACGATTCGG CTCCAGGGTA
TTGGAAGTCC TGGAATACAT GGTCGAAGAG GTCAAAGACG GATCGGATCC GCCTGCTGCC
GCGTCGATTT TGGAAGATTT CCAGGGATAC TGCGAAATGT ACAGAGATTA TCCCCCGTCC
GAAAAGGTTC GCAGCCTTGC CGTTGAGCTT CTCAATGACT GGGATGTCAT CTGGCTACCC
TTGAGATCTC CGGGGTTGCC ACTGACAAAC AATGATGCTG AACGTGCGCT GCGCCACTGG
GTCATCGCGC GTTTGATCAG CCACGGAACT CGTACGGCAG AAGGGAGCCA AGTATTGGGT
GTGCTGGCTA GCGTCATCGA AACTTGTCGA TTGCGGAACG TGTCCCCCTG GGACTATCTC
GCTAAGGTGA TTGCTGAACG GAGAAAGGGA AACCCCGTAC CACCGTTACC GGCTCCAGTA
GCCGCTTGA
 
Protein sequence
MTTVSKESRE RLNRTPDNSS QPPSSRPAYL GIPVEEDEAH LDEDEEDASP DKKKGANDEG 
GDDSPGPSGN STPPAPGKGK PDSSSEKPKG RAGKPIGAKG FGRTQIIPIR STVVHRAETC
AACDAALPLD ARFIARIGYV TIDLIRGGPD QPGLRLEGTK HLFGEIACRC GHISCTGPGT
GDRLEIAGRK TATNLSEWRI VGPMLAAFIV ALAKRMRLSR SKVQEFLIDW FGLELSVGTI
DNCIREVGLA ANPVQDELIA ELRASALAHV DETPWKQKGQ ALWLWVFATA NTVLFCVGPR
TRQMVMDILT EEFAGWLMSD GLMNYRTFSK RLRCWAHLIR KAKGLSVSLD KETKRFGSRV
LEVLEYMVEE VKDGSDPPAA ASILEDFQGY CEMYRDYPPS EKVRSLAVEL LNDWDVIWLP
LRSPGLPLTN NDAERALRHW VIARLISHGT RTAEGSQVLG VLASVIETCR LRNVSPWDYL
AKVIAERRKG NPVPPLPAPV AA