Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1376 |
Symbol | |
ID | 4482471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1668990 |
End bp | 1670498 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722119 |
Product | transposase IS66 |
Protein accession | YP_865293 |
Protein GI | 117924676 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.154743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAG TATCTAAGGA ATCTCGTGAG CGTTTGAACC GGACACCTGA TAACAGCTCC CAGCCGCCCA GCAGTCGTCC GGCGTACCTT GGAATTCCAG TTGAGGAGGA TGAAGCGCAT CTGGATGAGG ATGAGGAAGA CGCTTCGCCG GATAAAAAGA AGGGGGCCAA TGATGAGGGT GGAGATGATT CACCAGGGCC TTCCGGTAAT TCTACTCCCC CTGCTCCAGG AAAGGGCAAG CCGGATTCTT CAAGCGAGAA GCCGAAAGGT AGGGCTGGGA AGCCGATCGG CGCCAAAGGC TTCGGCCGTA CCCAAATAAT CCCGATTCGG AGTACCGTGG TTCATCGAGC GGAAACGTGT GCTGCCTGCG ATGCTGCCCT TCCCTTGGAT GCTCGATTTA TAGCTCGAAT CGGCTATGTG ACCATCGATC TGATAAGGGG TGGCCCGGAT CAGCCTGGAT TGAGGCTGGA GGGAACCAAG CACCTTTTTG GGGAAATTGC CTGTAGATGC GGCCATATTT CATGTACCGG GCCCGGCACA GGGGATCGAC TTGAGATTGC AGGACGCAAA ACTGCCACCA ATTTGAGTGA ATGGCGTATT GTCGGCCCCA TGTTGGCAGC TTTCATTGTT GCGCTCGCAA AACGGATGCG GTTGTCTCGC TCCAAGGTCC AGGAGTTTTT AATCGATTGG TTCGGCCTGG AGTTGAGTGT CGGGACCATC GACAATTGCA TACGTGAAGT CGGGCTGGCT GCCAACCCTG TTCAGGATGA ACTGATTGCT GAACTTCGTG CATCTGCTCT GGCTCATGTA GACGAAACGC CTTGGAAGCA AAAAGGTCAA GCTTTGTGGC TTTGGGTTTT CGCGACGGCC AATACAGTCT TGTTTTGTGT GGGACCTCGG ACACGGCAAA TGGTCATGGA TATCCTGACC GAGGAATTCG CGGGCTGGCT GATGAGCGAC GGACTCATGA ACTACCGGAC TTTTTCAAAG CGGCTGCGTT GCTGGGCACA CCTGATCCGG AAGGCCAAAG GGTTGTCGGT AAGCCTGGAT AAAGAGACCA AACGATTCGG CTCCAGGGTA TTGGAAGTCC TGGAATACAT GGTCGAAGAG GTCAAAGACG GATCGGATCC GCCTGCTGCC GCGTCGATTT TGGAAGATTT CCAGGGATAC TGCGAAATGT ACAGAGATTA TCCCCCGTCC GAAAAGGTTC GCAGCCTTGC CGTTGAGCTT CTCAATGACT GGGATGTCAT CTGGCTACCC TTGAGATCTC CGGGGTTGCC ACTGACAAAC AATGATGCTG AACGTGCGCT GCGCCACTGG GTCATCGCGC GTTTGATCAG CCACGGAACT CGTACGGCAG AAGGGAGCCA AGTATTGGGT GTGCTGGCTA GCGTCATCGA AACTTGTCGA TTGCGGAACG TGTCCCCCTG GGACTATCTC GCTAAGGTGA TTGCTGAACG GAGAAAGGGA AACCCCGTAC CACCGTTACC GGCTCCAGTA GCCGCTTGA
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Protein sequence | MTTVSKESRE RLNRTPDNSS QPPSSRPAYL GIPVEEDEAH LDEDEEDASP DKKKGANDEG GDDSPGPSGN STPPAPGKGK PDSSSEKPKG RAGKPIGAKG FGRTQIIPIR STVVHRAETC AACDAALPLD ARFIARIGYV TIDLIRGGPD QPGLRLEGTK HLFGEIACRC GHISCTGPGT GDRLEIAGRK TATNLSEWRI VGPMLAAFIV ALAKRMRLSR SKVQEFLIDW FGLELSVGTI DNCIREVGLA ANPVQDELIA ELRASALAHV DETPWKQKGQ ALWLWVFATA NTVLFCVGPR TRQMVMDILT EEFAGWLMSD GLMNYRTFSK RLRCWAHLIR KAKGLSVSLD KETKRFGSRV LEVLEYMVEE VKDGSDPPAA ASILEDFQGY CEMYRDYPPS EKVRSLAVEL LNDWDVIWLP LRSPGLPLTN NDAERALRHW VIARLISHGT RTAEGSQVLG VLASVIETCR LRNVSPWDYL AKVIAERRKG NPVPPLPAPV AA
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