Gene Mmc1_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1369 
Symbol 
ID4482464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1663464 
End bp1664282 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content54% 
IMG OID639722112 
Productintegrase catalytic subunit 
Protein accessionYP_865286 
Protein GI117924669 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG AGCACAATGG CCGTATTCCC CGTGATTTTT GGCTGGAAGA GTGGGAACGA 
GAGGCGACCG TTAACTTTTT CCATGAGCAT CCGGATGAAG GCTACCGACG TTTGACCTAC
ATGATGTTGG ATGCAGATGT TGTGGCAGTC AGCCCTGCCT CTGTCCTACG TGTTCTCAGA
GCGGCCGGGT TGATGCGGAA GTGGAGTCCG CCCCCTTCTC AGAAAGGAAC GGGGTTCAAG
CAGCCGCTGG AGCCACACAA ACACTGGCAT ATCGACATCT CCTACTTGAA CATTCAGGGG
ACGTTTTACT ACCTATGCAG TGTGTTGGAT GGGTGCAGCC GCTTTATCCT TCACTGGGAG
ATCCGGGAAT CGATGAAGGA GGATGAGGTT GAGGTTATCC TGCTTAGGGC CAAGGAAGCC
TACCCAGAAG CCAAGCCGCG TGTGATCTCG GATAATGGCC CTCAGTTTGT GGCTAAGGAT
TTCAAGACCT TTATCCGGGA AAGCGGCATG ACGCATGTGC GGACTTCCCC TTATTATCCG
CAGAGCAATG GCAAACTGGA GCGGTTTCAC GGTACCCTGA AACGCGAGTG TATCCGTCCC
CAGACGCCCC TTTCTCTGGA AGATGCACAG CGGGTTGTGG AAGGATACGT TGAGCACTAC
AACACATACC GGTTGCATAG CGCCACCGGC TATATCACTC CAAAGGACCG CCTAGAAGGG
CGTCATGATG AGATCCTGGC TGCACGCGAA CAAAAGCTGG AAACGGCCAG AGAAGAGCGT
AAAATCAGGC GAAGACGGCA GGCTTTTCAG CCATCCTAA
 
Protein sequence
MANEHNGRIP RDFWLEEWER EATVNFFHEH PDEGYRRLTY MMLDADVVAV SPASVLRVLR 
AAGLMRKWSP PPSQKGTGFK QPLEPHKHWH IDISYLNIQG TFYYLCSVLD GCSRFILHWE
IRESMKEDEV EVILLRAKEA YPEAKPRVIS DNGPQFVAKD FKTFIRESGM THVRTSPYYP
QSNGKLERFH GTLKRECIRP QTPLSLEDAQ RVVEGYVEHY NTYRLHSATG YITPKDRLEG
RHDEILAARE QKLETAREER KIRRRRQAFQ PS