| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1355 |
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| Symbol | |
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| ID | 4481827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1647666 |
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| End bp | 1650530 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639722098 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_865272 |
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| Protein GI | 117924655 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGGA TGAATTGGTC AAAAACTTCT TTTGCCCCAG GGGCGCGCAT CCTTGCCAGG
GACGCCGAAT GGCTCATCCG TCGGGTGGAC AACACCTCCA CCGGTGGTCA GGCATTGAAG
GTGGTCGGAA TTTCCGAACT GGTGAGGGAC AAAGAAGCGA TTTTCCTGAC CGAGATTGAC
GACAAAATTG AGGTGTTGGA TCCTGCCAAG ACCAATCTGG TTCAGGATGA GTCCAGCGGC
TACCGGTCGT CGTTGCTATA CCTGGAAAGC CTGCTCCGTC AGACCCCACC AACGGATGAG
CGTATTTATA CCGGCCATCG TGCGGCTATG GATGCGGTGC CCTACCAACT CGACCCAGCC
ATCCAGGCTC TGCAACAACC CAGGCAGCGG ATTCTCATTG CTGATTCTGT CGGTCTTGGC
AAGACTTTGG AGGCTGGCAT CCTGGTCTCA GAACTGATTC GCCGTGGTCG TGGCAAACGC
ATTCTGGTCG CGGCAGTCAA GAGCATGTTG ACGCAGTTCC AGAAAGAGTT CTGGAGCCGC
TTTACCATTC CGCTTACACG ACTGGACTCC ATTGGCCTCC AGCGCATCCG CTCCCGCATT
CCAACCAACC ACAACCCGTT CCACTACTTT GACAAATCCA TCGTCTCCAT CGATACCCTC
AAACAGGATG CCGAATACCG CACGTACCTG GAGAACGCAT GGTGGGACAT CATCATTATT
GATGAAGCCC ACAATGTGGC CGAGCGCGGC AAGGGAGCTT CGCTGCGGTC TCGTTTGGCC
AAACTGCTCT CCACCCGTTC GGATACTTTG ATCATGCTCT CAGCCACGCC CCATGATGGC
AGCGCCGAGA GCTTCGCCAG TCTGATGAAC ATGCTCGATC CGACGGCTAT CGCCAACCCG
GGTGAATACA CAAAAGACGA AATCCAAGGG CTGTTCATTC GGCGGTTCAA GAAGGACATC
CAGTCCCAGG TGGCCAGCGC ATTCAAGGAA CGGAAGATTG CCACCGCACC CTGCGATGCC
TCACCTGTCG AGGAAGCCGC CTTCGATACT TTGACCGCCA CCCGCTTCGC CAAACTGGAT
CGCGGCAAGG GTGCGGGTGA ACTCTTCAAA ACAACGTTGG AGAAATCCCT CTTCTCCAGT
CCGATGGCTT GCATGCAGAC CATTGGCAAT CGCATCCGCC AGTTGGAGAA ACAGGAGAAC
CCCGATTTGC AAGAGGACAT TGGGGTTCTG AAGGTTCTGG CCGAGGAGGT GAGGCAGATC
ACCCCTGAAC ATTTCACCAA ATACCAGCGT CTGGTTCAGG CCATCCGCAG GGATTTTGGC
TGGGATGGCA AGAATACCGC TGACCGCCTC GTGCTCTTCA CCGAGCGTAT CGAGACGCTG
AAGTTTCTGG CAGAGCATCT GCCTCGGGAT CTCAAACTCA AGGACAAGCA GGTGGAGATT
CTCCACGGGT CCATGTCCGA TGTGGAGCAG CAGCAGGTGG TAGAGGCGTT CGGCAAGGAT
GAGGAGCCTG TCCGTCTGCT CATCGCTTCG GACGTGGCCT CGGAGGGAAT CAACCTTCAC
TACCTGTGCC ATCGGATGAT CCACTTTGAT ATCCCGTGGT CGTTGATGGT GTTCCAGCAG
CGCAACGGGC GTATCGACCG TTACGGCCAG GAACAGACGC CCCACATCGT TTACCTGACG
ACCAACAGTC AGAACGACAA AATCCGTGGG GATATGCGTA TTCTGGAACT GCTGATCCAG
AAGGACGAGC AGGCCACCAA GAACATCGGC GATCCTGCAG CTTTTATGGG TGTTTACGAT
ATCAATGAGG AAGAGCGCCT GACCGCCGAA GCCATGGAGG CGAGCAAGAC ACCCGAACAG
TTCGAGGCCG AACGTCAAAG TAAGCCAGAG GAGCAGTGGG ACGTGCTCTC CATGATCATG
GGCAACACGC CTCCGCCTGC AGGCGAGATG GCCACGGACA ACAAGGCCAG AATGCCCGCC
CTGTTCGCCG ACGACTATGC CTACCTGGAA GCGGCCCTGA GCCATTTAGG CGAAAACCGC
GACCTGCAGG TGCGCATGGA TGCTCAGGCC AAGATGGTGG AGTTCACGGC CCCCAAGGAA
CTGAAACAGC GTTTCCGTTT TCTCCCCAGG GAGATTTGGC CTGAAAACGG CCAGTTTTCT
CTCTCGCAGG ATCGGGACGT CATCCAGCAG GAAATCAAGC GCAGCCGCAA GGATGAGAAC
GCATGGCCCA CCATTCACTA CCTCTGGGAG CAGAACCCCA TGATGCAGTG GGTCAACGAT
CAGGTGCTGG CGGCGTTCAA GCGTCATGAG GCCCCCGTCA TCTGGTTGAA CCAAGGGCTG
GGTGGAGATG AAACGGTCTT CCTGATGTCG GGCCTGATTC CCAACCGCAA AGGTCACCCT
CTTGTTCATC GCTGGTTTGG CGTTGGCTTC CAGGGGAAGG ACTTCAGTGA AATTGAAGAA
CTCGACACCC TCTTGGGCCG TACAGGGTTG GGCAAACGCT TGATTCCCAA TCCCATGGTT
TATATGGACG ATTTTCTCCT CAAGCAGTTG TTGCCCAAGG CCGTGGAGCG GGCGAGAGGG
TGGATGTCAG GTCAGCGCAA TGATTTTGAG GATCATATCA ACCCCAAGCT CAACGACCAG
TTAAAGAGGC TGGAAGGGCT GCGCGGAAGG CAATTCCAGC AACTGGAACT GCGCTTTGAT
GACCTGAAAC AGGCGGCCAG CATTGTGGAG AGTCGCAAAG AGCAGGAAAA GAGACGGATT
GATACGTTGT TCGATACTTA CCTGGAGTGG GTCGAGGATA CCATGACCAC CGAAGAGCAC
GCCTATATCC AGGTGGCGGC TGTTCTCGTC GGCAGGCAGA GGTAG
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| Protein sequence | MSGMNWSKTS FAPGARILAR DAEWLIRRVD NTSTGGQALK VVGISELVRD KEAIFLTEID
DKIEVLDPAK TNLVQDESSG YRSSLLYLES LLRQTPPTDE RIYTGHRAAM DAVPYQLDPA
IQALQQPRQR ILIADSVGLG KTLEAGILVS ELIRRGRGKR ILVAAVKSML TQFQKEFWSR
FTIPLTRLDS IGLQRIRSRI PTNHNPFHYF DKSIVSIDTL KQDAEYRTYL ENAWWDIIII
DEAHNVAERG KGASLRSRLA KLLSTRSDTL IMLSATPHDG SAESFASLMN MLDPTAIANP
GEYTKDEIQG LFIRRFKKDI QSQVASAFKE RKIATAPCDA SPVEEAAFDT LTATRFAKLD
RGKGAGELFK TTLEKSLFSS PMACMQTIGN RIRQLEKQEN PDLQEDIGVL KVLAEEVRQI
TPEHFTKYQR LVQAIRRDFG WDGKNTADRL VLFTERIETL KFLAEHLPRD LKLKDKQVEI
LHGSMSDVEQ QQVVEAFGKD EEPVRLLIAS DVASEGINLH YLCHRMIHFD IPWSLMVFQQ
RNGRIDRYGQ EQTPHIVYLT TNSQNDKIRG DMRILELLIQ KDEQATKNIG DPAAFMGVYD
INEEERLTAE AMEASKTPEQ FEAERQSKPE EQWDVLSMIM GNTPPPAGEM ATDNKARMPA
LFADDYAYLE AALSHLGENR DLQVRMDAQA KMVEFTAPKE LKQRFRFLPR EIWPENGQFS
LSQDRDVIQQ EIKRSRKDEN AWPTIHYLWE QNPMMQWVND QVLAAFKRHE APVIWLNQGL
GGDETVFLMS GLIPNRKGHP LVHRWFGVGF QGKDFSEIEE LDTLLGRTGL GKRLIPNPMV
YMDDFLLKQL LPKAVERARG WMSGQRNDFE DHINPKLNDQ LKRLEGLRGR QFQQLELRFD
DLKQAASIVE SRKEQEKRRI DTLFDTYLEW VEDTMTTEEH AYIQVAAVLV GRQR
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