Gene Mmc1_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1336 
Symbol 
ID4480743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1620798 
End bp1621112 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content51% 
IMG OID639722079 
ProductXRE family transcriptional regulator 
Protein accessionYP_865253 
Protein GI117924636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.40166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG GCTACAACCC TCTTCCCCTC AATATTAAGG ACGAGTTAAC CCACGCCCGA 
CTGAAGCCGG GCTTTAGTGA GGCCTATGAT GCTTTGGAAG ATGAGTTCCA GGCTTTACGA
ACCTTCCTGT CGGCCCGCAA GGAAGCAGGG CTTACCCAGG AAGAGATTGC CAAACGAATG
GGCACCACCA AAAGTGCCGT ATCCCGTCTG GAATCTTCCC TGGGCGATCA TAAACACTCT
CCATCTATTG CCACTCTGCG TAAATATGCC AAAGCGGTTG GCTGTAAGTT GGAGATCAAG
CTGGTTCCTC AGTAA
 
Protein sequence
MADGYNPLPL NIKDELTHAR LKPGFSEAYD ALEDEFQALR TFLSARKEAG LTQEEIAKRM 
GTTKSAVSRL ESSLGDHKHS PSIATLRKYA KAVGCKLEIK LVPQ