| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1326 |
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| Symbol | |
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| ID | 4483796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1614072 |
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| End bp | 1615382 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639722069 |
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| Product | serine peptidase |
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| Protein accession | YP_865243 |
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| Protein GI | 117924626 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0433516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA ACATGTTGCC CCATCTGGCA TCCCGGATTC TCGGGACGCC GCTTATGGTC
GACCGCGCCC GTTTGGAGAC CATCCTCTCG GTCATTGGTC CCCGCGTCGG CTTGGAGCCA
ACGGCCATGC CCAGCGGCTT TGAGCCCAAG GACCATAGCT CTGATTTGAT GGTCACCCCC
AATGGAATCG CCGTCGTGCC TATCCACGGC ACCCTGGTAA AACGGGCGGG AGCCATTGAG
GCTGCATCGG GACTCACGTC CTACGCATCC GTTGAAGAAA AACTGCTGGA TGCTGCTACC
GACCCAGCCG TGCGAGCAAT CCTGATGGAT ATCGACTCCC CTGGTGGTGA GGTGGGTGGC
GTGTTCGATC TGGCCGACAT GATCAGTGAA GCGGGGCAGG GCAAGCCCAT CTGGGCGCTG
GCCGATGACG CTTTCTCTGC TGCCTATCTT ATCGCCTCCC AGGCTCATCG GATCATCGTG
CCCCAGACTG CGGGGGTGGG CTCCATCGGC GTCATAGCTG TTCATGTGGA TGAGTCGGAG
AAGGATGCCA AAGAGGGGCG TAGCTACACC ACGGTGTTTG CCGGAGCCCG GAAAAATGAC
TTTTCCACCC ACGCCCCTCT CTCTCTAGAG GCCCGGACTA ACCTGCAACT GGAGGTAGAT
CGGCTCTACG GTATGTTCGT CGCCGCCGTG GCGGCAGGTC GCAAGATGCA TGAATCGGCG
GTGCGTGCCA CCGAGGCAGG CCTGTTCTTT GGCGACAAGG CAATCCGGGT TGGTCTGGCT
GACCAGGTTG GCACCATCCG GGATGCCCTG GCTGGCCTGT CAATAACTAT TGATGCGTCC
AAAAAGACCC ATTCTCACCG AGCGGCACTG CCGCGGGAAC CTGTGTATAT GGAGGAAACC
ATGCCCATGG AAGAAAATCC GGCGGCTGAA ACATCTGTTG TCACGTCACG ACAATCCCAA
CCTGACCTTC ACGTCAAATC CGACATAATG TCGGATTTGA CTGACCAATC TGCGGTATCC
AACGTTGTGG ACCTAGACAA GGTCCGAGCC GAGCATGGCC AACAGATGCG TAACGAAGCG
CAGGCTATTG TCGATCTCTG TGCCCTGGCG GGCATGCCTC ACTTGGCAGG CGGCTATATC
GCCGAAGGTA CTGCTGCTGA GGCGGTACGC AAAGAGCTAC TGGCCAAACG GGCCGATGCT
GAAGAGATCC ACTCCGAGGT GATGCCTGGT GATGGCACCC GTATGCAGCC CAGACAGAGT
CTTGAAACCA ACCCGGTGGT GGCCTCCTGC CGCAAACTCG CCGGTCAATA A
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| Protein sequence | MTQNMLPHLA SRILGTPLMV DRARLETILS VIGPRVGLEP TAMPSGFEPK DHSSDLMVTP
NGIAVVPIHG TLVKRAGAIE AASGLTSYAS VEEKLLDAAT DPAVRAILMD IDSPGGEVGG
VFDLADMISE AGQGKPIWAL ADDAFSAAYL IASQAHRIIV PQTAGVGSIG VIAVHVDESE
KDAKEGRSYT TVFAGARKND FSTHAPLSLE ARTNLQLEVD RLYGMFVAAV AAGRKMHESA
VRATEAGLFF GDKAIRVGLA DQVGTIRDAL AGLSITIDAS KKTHSHRAAL PREPVYMEET
MPMEENPAAE TSVVTSRQSQ PDLHVKSDIM SDLTDQSAVS NVVDLDKVRA EHGQQMRNEA
QAIVDLCALA GMPHLAGGYI AEGTAAEAVR KELLAKRADA EEIHSEVMPG DGTRMQPRQS
LETNPVVASC RKLAGQ
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