Gene Mmc1_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1302 
Symbol 
ID4482658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1595780 
End bp1596496 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID639722045 
Producthypothetical protein 
Protein accessionYP_865219 
Protein GI117924602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.226488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAG ACGAAATGCA GATGGTAACC GTCGGTGAAA CAGCTCTATC GGTTATCGAA 
TATAAAGGCA GCCGTGTTGT CACCTTTGCC ATGGTTGATC AGGTTCATCA GCGGCCAGAA
GGGACGGCCA AACGCAACTT TCACGACAAC CGTCCTCGAT TTGAAGAGAA CGTTGATTTT
GCCAAAATAT CGAAGGACGA ATTTCGTACC GACCTATGGG AATCCTTTGG ATTCAGCAAG
TTTGCATCCT CTGGAATTCT CCTGACCCAG ACTGGCTACC TCATGCTGGT GAAATCCTTC
ACCGACGATC TGGCATGGAA GGTTCAGAGA GAGCTGGTCA ATCGCTACTT CCGAACCGCA
CCCACCTCCA CGGCCCACCA GCTCTATCTG ATGGCTAAGG CCAACTGGGA ACAGGAGCAG
AGACTGAGCC AGATTGCGGA GCTGCAGCAT AATCAACAGC AGCAGTTGGA TGCATTGGCG
CAACGCCAGT CAGACATGGA CGGCAACACC GGATACATGA CTGCCCTGGC CTATTGCCGC
AAAGAGAGTA TCCCTGCACC TCTCGCTTAT GCCAAGCAAC TGGGCATAAA GGCATCTGAG
ATGTGTCGGA ACCTCGCCAT TCGTATGGGA CAGGTCCCTG ATGAGCGCTG GGGGTCGGTC
AATAGTTATC CCATAGAGAT CCTCCGTGAA TGCCACCAGG ATATGAAAGG GGCATGA
 
Protein sequence
MIQDEMQMVT VGETALSVIE YKGSRVVTFA MVDQVHQRPE GTAKRNFHDN RPRFEENVDF 
AKISKDEFRT DLWESFGFSK FASSGILLTQ TGYLMLVKSF TDDLAWKVQR ELVNRYFRTA
PTSTAHQLYL MAKANWEQEQ RLSQIAELQH NQQQQLDALA QRQSDMDGNT GYMTALAYCR
KESIPAPLAY AKQLGIKASE MCRNLAIRMG QVPDERWGSV NSYPIEILRE CHQDMKGA