Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1300 |
Symbol | |
ID | 4482656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1593655 |
End bp | 1595337 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639722043 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_865217 |
Protein GI | 117924600 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.49268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.27314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTTC GCCCTCGACA GGAGACTTTT GTCCGCAGAT CGGTCGATGC CCTTTACGAA CATGGTGACA CATTGGCTGT TGGTCCTACC GGCATGGGCA AGAGCATATG CCTTTCAGCT GTTGTTGGTC GTGTGATTTC CAAAAGTGGT GGGAAAGCCT GTGTCTTGGC TCATCGGGAC GAACTTACCC AGCAGAATGT GATGAAATTC ACTAAGGTTA ATCCAGGGCT TTCCACCTCT GTAGTGGATG CCCGTGGCAA ATCGTGGCGC GGGCGCGCCA CCTTTGCCAT GGTGCCCACT CTTGCCCGGC AGAAAAATCT GGATGCCATG CCAGATCTGG ATTTGCTGGT AATTGATGAG GCCCACCATG CGGTGGCCAA CAGTTACACC CGCATTATTG ATTCGGCTAG AGGAATAAAC CCAAACTGCA TGATTTATGG TCTGACTGCC ACCAGTGGTC GTGGTGATAA AAAGGCTCTC AGACCGATCT TTTCTAATGT TGCTGACCAA GTGCGGCTTG GAGAATTGAT CCAGTCTGGC CATCTGGTTA AACCCCGTAC ATTCGTTGTC GATGTAGGCA CTCAGGATGC GTTGAAAAGC GTACGGAAGA CAGCAGACGA CTTTGATATG GCCGAGGTGT CCCAGATCAT GAACAAGGCC CCGGTCACCG AGGCTGTCAT CAAACATTGG AAGGAAAAAG CCGGCACCCG AAAGACCATC GTATTCTGCT CCACCGTGGA TCATGCCCAG AACGTTACAG ATGCTTTCAA CAATGCGGAT GTGGAAGCGG TGATGGTCCA TGGAGAGCTT ACCACCGCAG AGCGCAAAGC AGCATTGGCT CGGTTTGAAA AGGGTTCAGC CATGGTGGTT GTGAACGTGG CGGTTCTCAC AGAAGGCTAC GATCATCCAC CCACATCCTG CGTAGTTCTG CTTCGGCCAA GTTCGTACAA ATCCACCATG ATCCAGATGG TGGGGCGCGG GCTGCGCACC GTGGATCCCG CCCTGTTTCC TGGACTGGTC AAGACCGACT GTATTGTCCT GGATTTCGGC ACTTCATCCA TCCTTCACGG CTCCCTGGAA CAGGACGTTA ACCTGGATGG AAAGGAGATC CAGGGAGCGG CTCCCACCAA GGAGTGCCCC GAGTGCCAGG CCATCGTGCC TTTGGCAGTC AGGGAGTGCT CTCTTTGTGG GTATGTGTGG GAATCGGAAG TTACTGGAGA AGGGCCGGAA TCCATCACCG ACTTCATCAT GTCCGAGGTG GACCTGCTCA AACGCTCCAG CTTCCGCTGG GTTGACCTGT TCGGAGATGA TGCCGCCATG GTGGCCAACG GCTTCCACGC CTGGGGTGGG ATCTTCTTCC TCAATGGCAA CTGGCACGCT GTGGGTGGAG CCAAGGGCCA GCCCACCAAG TTGCTCTCTA TCGGTGAACG TACCATCTGT CTTGCTGCCG CCGATGACTG GCTCAATGAG AGCGAAACCG ATGAGTCGGC ACATAAAACC AAATCCTGGC TCAACCAACC CCCAACGGAT AAGCAGCTTC AATATCTGCC ACCAGCCATG CGCATGGATA TGGGGCTGAC CCGTTACCAC GCATCAGCGC TGCTGACCTT CCGCTTCAAT AAAGCTGCTA TTCGCAGTTT GATATTTGAA GCGGACCGAC AGGCGCTGGC GGAGGTGGCG TGA
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Protein sequence | MILRPRQETF VRRSVDALYE HGDTLAVGPT GMGKSICLSA VVGRVISKSG GKACVLAHRD ELTQQNVMKF TKVNPGLSTS VVDARGKSWR GRATFAMVPT LARQKNLDAM PDLDLLVIDE AHHAVANSYT RIIDSARGIN PNCMIYGLTA TSGRGDKKAL RPIFSNVADQ VRLGELIQSG HLVKPRTFVV DVGTQDALKS VRKTADDFDM AEVSQIMNKA PVTEAVIKHW KEKAGTRKTI VFCSTVDHAQ NVTDAFNNAD VEAVMVHGEL TTAERKAALA RFEKGSAMVV VNVAVLTEGY DHPPTSCVVL LRPSSYKSTM IQMVGRGLRT VDPALFPGLV KTDCIVLDFG TSSILHGSLE QDVNLDGKEI QGAAPTKECP ECQAIVPLAV RECSLCGYVW ESEVTGEGPE SITDFIMSEV DLLKRSSFRW VDLFGDDAAM VANGFHAWGG IFFLNGNWHA VGGAKGQPTK LLSIGERTIC LAAADDWLNE SETDESAHKT KSWLNQPPTD KQLQYLPPAM RMDMGLTRYH ASALLTFRFN KAAIRSLIFE ADRQALAEVA
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