| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1299 |
|---|
| Symbol | |
|---|
| ID | 4482655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1592996 |
|---|
| End bp | 1593658 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639722042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865216 |
|---|
| Protein GI | 117924599 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.222208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC TAAATATGGT GGGAAAAGTG ATCGGGCGTC TTGTCGTCCT TTCACCTTTC
AACACTTCCA AGCCAGGAAG GCATTGGAAA TGCCGTTGTG AGTGTGGATT TGAAACCATC
CAAAGCACTT CGAAGCTAAA CGAAGCCGTA AAGAAAGGAA AGAATATCGG CTGTAAGTGT
GCGAGAGAGG CTTCCATTCT CAAGGCAGCA AAAGCAGCCG TTCAAATACT TCGAAAACAC
GGTTTGAACC ATTCCAAACT TCATTGGATG TACGACAACA TGATGAAACG GTGTTATCGG
CCAGAGACAA ATCGCTATGA GCGATATGGC GGGCGCGGCA TCGGTGTGTG TCAAGAGTGG
AGTGATGACC GTTCTGCTTT TTATACCTGG GCACTAGAAC AAGGATGGGA AGTAGGGCTC
TCTATCGACC GAATCGATGT GGACGGTGAT TACACTCCTA CAAACTGCCG TTTCATTCCA
ATCGAAAGGC AAGCCAGCAA TACGTCCAGG AATCGTTATT TGGAGTGGAA TGGTAAGCGT
CAAACCGTTT CTGACTGGGC GCGGGAACTT GGGGTTCGAC CTCAGGCATT GCAACACCGC
GTTGATCGTG GCTGGAACCT TCATCGCATG TTTACACAGC CATTCAGGAG GATCCATCAA
TGA
|
|---|
| Protein sequence | MAKLNMVGKV IGRLVVLSPF NTSKPGRHWK CRCECGFETI QSTSKLNEAV KKGKNIGCKC
AREASILKAA KAAVQILRKH GLNHSKLHWM YDNMMKRCYR PETNRYERYG GRGIGVCQEW
SDDRSAFYTW ALEQGWEVGL SIDRIDVDGD YTPTNCRFIP IERQASNTSR NRYLEWNGKR
QTVSDWAREL GVRPQALQHR VDRGWNLHRM FTQPFRRIHQ
|
|---|
| |