| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1283 |
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| Symbol | |
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| ID | 4480596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1573400 |
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| End bp | 1576750 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722026 |
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| Product | hypothetical protein |
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| Protein accession | YP_865200 |
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| Protein GI | 117924583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2251] Predicted nuclease (RecB family) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.112248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGGC ACTCCGGCCA TATTCTGTTT GCTGCCTCGG ACCTGAATGG ATTCCTGGGG
TGCAGGCACA GCACTTTTCT GGATCTTAAG GACCTGGATG AGCGCCTGCC TCGTGCTGAG
GTGAGTGCAC AGGATAGGCT AATCCAGGAG CGTGGCCATG AACATGAAGC TGAGTATCTG
GAGTCGCTAA AACAATCAGG GCTCAGTGTC GTTGAGATCC CCAGTGAAGG TGGCTTGAGC
GATCGGGTTC AGATGACAGC CGATGTGATG GCTGATGGGC CAGACATTAT TTACCAAGCA
GCTTTTTTGG ATGGTCAGTG GCATGGCTAT GCTGATTTTC TCCAGAGGGT TGATCGCCCC
TCAGAGCTGG GTTCTTTCAG CTATGAGGCT GTAGATACCA AGCTGACCAA ACATCCAAAG
CCAAAGTTTG TCATCCAGCT CTGCCTCTAT TCTGATTTTA TCGCAAAGAT GCAAGGAACA
CGTCCTCACA GTATGTCGCT GGTATTGGGG GATTTTTCTC AGCTCCATCT CCGACTTGAT
GATTTCGCCT ATTACCACGC CATTGTTAAA CAGCGATTTG AAGAGTATGT AGCAGCGCCC
CCAGCAGAGT CCCAAGCTAT GCCCTGCGGG TTTTGTGAGC TATGCAAATG GCGGGAACTC
TGCGGAGAGC AATGGCTACA GGATGACCAT CTAAGCCAGG TAGCGAATAT CAAGCGGGAC
CAGGTGTTGA AGCTGGAGAC AGCTGGCATA TCTACAATGG CTACGCTGGC CAAGGTAGGC
GAAAAATCAA CAGTCCCATC TATGACGCAG GAGACGCTGG ATAAATTACG CGCACAAGCT
AAGCTACAGC TCCATAAGCG GGATACTGGC GAGAACAAGG TTGAGCTCCT GGATGCTGCG
CCTGGTCGTG GCTTTTCCAA AATGCCTAAG CCATCTGACG GTGATCTCTT TTTTGATATG
GAGGGAGACC CGCTCTACCC AGATGGGCTG GAGTACCTGT TTGGTTTCTA CTTTACAGAA
AGCGGACAAC CAGTCTTTAA ACCATTCTGG GCACATGACC ATAAAGAGGA AAAGCGGGCC
TTACAGGAGG TGATGGACTT TCTCGTTACC CACCTGCGAG CTCATCCCGA TGCCCACATC
TACCACTACA ATCACTATGA AGAGACTGCT CTTAAGCGCC TGGCTTCCCA GTACGCCACC
AGGGAAGCGG AAGTAGATGA TCTGCTGCGT GGTCGTAAGC TGGTGGATCT GTTTAAGGTG
GTTAGGGAGG CAATCCGAGT TTCGGAGCCC AAATATTCCA TCAAGAACCT GGAAGCGTTC
TACATGGAGA AGCGGGATGC GGAGGTGGCC ACCGCTGGGG ACAGCATCGT GGTTTACGAA
GAGTGGCGAC AAAGCCAGGA TCCCCAGCTG CTTCAGAACA TCAGCGACTA TAACGAGGAC
GACTGCCGCT CCACATTGTT GCTCCGTGAT TGGCTTCTCA CCCTCCGAGC AGCGGACATG
CCGTGGTTTG ATCTGACGGC AGGAGCCCCT TCCGAAGAGA AACTGCAAGC TCAGCAGGAT
GCAGAGGAAA ACCGAGTCCG CTACGAACAA AATCTTACCC GCGGCCATGA GGGGCAGGAT
TACGAATTTC GGGAGCTCGT TGCTCAACTC CTTGATTTTC ACCGTCGAGA GGCAAAGCCC
CAGTGGTGGG CTATGTTCGA CCGGCAGGAG CGGACCGATG AAGAGCTGGT CGATGATGCG
GAGTGCCTGG GTGGGCTAAA GGCGGATCCC AATCAACCGC CTTACAAAGA GAAGCGGTCG
ATGGTCTACA CCTACCGCTT TCCGGCCCAG GTGACCAAGC TGAAGAAAGG CTCTCAATGC
CTGCGGGCAG ATAGTCTGGA GAGTGCCGGC ACCATCGTTG ATCTCAGTTG GGATCAACGG
ACAGTCAGCA TCAAAAAGGG CCCCAAGGGC GGACCGCTGC CAGACGTGCT CTCCATCACG
CCGCCTGGTC CCATTAATAA CAGCGTGCTC AAAGACGCTG TCTATCGCTT TGCCGATGCC
ATCATTGCTG GAAGTGGTAA GTATCAAGCG CTGGCCTCCT TTCTGCGGAG AGGAAAGCCA
GAGATCGCGG GACACGAGGC AGACACACCC ATCGTTCCAG ATGGTGACAA CTCACTGCCC
GCGATCTTCG AGGCAGTCGG CAACCTTCAA AACAGCTTCC TGTTCATCCA GGGACCGCCC
GGAGCCGGGA AGACCTACAC CTCCTCCCAT GTGATCGTGG AACTGTTGCG CCGTGGCAAA
CGGATCGGCA TCTCCTCCAA CTCCCACAAG GCGATCAACA ATCTCCTGGA TGGCATTGAG
AAAGCTGCAA TCAAGGAAGG CATCACCTTC CGAGGACAGA AGAAGTGTTC TGCAAGCAAT
CCCGACTCTG TCTACCTCGG AGAGATGATC GAGAGCGTAT CGGATAACGG TGGAATGGAT
CCTGAGTCAG ACATCATCGC CGGGACCGCA TGGCTATTTG CCCGGGATGA GTACCACGAA
GTACTGGACT ACCTCTTCAT CGACGAGGCC GGGCAGGTTT CCCTGGCCAA TCTGGTGTCC
ATGGGGCTGA GTGCACGGAA CATTGTTCTC GTTGGCGACC AGATGCAGTT GGGTCAGCCC
ATCCAGGGTA CACACCCGGG TGATTCTGGC ATGTCCATCC TGGACTACTT GTTGGAAGGC
GAGTCCACCA TTCCAGCGGA CCGGGGGATC TTCCTGGGGA CGACGTGGCG GATGCACGAG
AACGTCTGCC GGTTTATTTC CGATGCTGTC TATGAAGGGC GGCTGCACCC CGAGGCGGGC
ACCCGAAATC AGGCTTTGAT CCTGTCTGAA TCCGCGCACC CGGAGCTACG CCCCAACGGC
ATCCGCTTCA TTGAAGCCAA GCACGAAGGT TGCTCCCAGA AGAGCGAAGA GGAAGGTCGA
ATCATTCAGG AGTTGATCGC CAGCCTGCTC GAGCAGAGGT ACCGGGACCG GGATGGCAAT
GAGCACTCTG TGGCCCCCGA TAACATCCTG GTGGTGACGC CCTACAATGT GCAGGTGAAC
TACCTGGCCT CCATCCTTCC CGAGGGGGTG CAGGTGGGGA CCGTGGATAA GTTCCAGGGC
CAGGAGGCGG AGGTGGTGAT CATTTCCATG GTGACCTCTG GGGCTGAAGA CCTACCCAGG
GATATCGAGT TCCTCTACAG CAAGAACCGG CTCAACGTGG CCATCTCACG GGCGCGGACA
CTGGCCATGA TCGTGGCCAA TCCGAACCTG TTGGAAATTC CCTGCCAGAC GGTGGAACAG
ATGCGGTTGG TGAATACGCT TTGCTGGGTA AAATCATGTT CCGCCGAATG A
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| Protein sequence | MRRHSGHILF AASDLNGFLG CRHSTFLDLK DLDERLPRAE VSAQDRLIQE RGHEHEAEYL
ESLKQSGLSV VEIPSEGGLS DRVQMTADVM ADGPDIIYQA AFLDGQWHGY ADFLQRVDRP
SELGSFSYEA VDTKLTKHPK PKFVIQLCLY SDFIAKMQGT RPHSMSLVLG DFSQLHLRLD
DFAYYHAIVK QRFEEYVAAP PAESQAMPCG FCELCKWREL CGEQWLQDDH LSQVANIKRD
QVLKLETAGI STMATLAKVG EKSTVPSMTQ ETLDKLRAQA KLQLHKRDTG ENKVELLDAA
PGRGFSKMPK PSDGDLFFDM EGDPLYPDGL EYLFGFYFTE SGQPVFKPFW AHDHKEEKRA
LQEVMDFLVT HLRAHPDAHI YHYNHYEETA LKRLASQYAT REAEVDDLLR GRKLVDLFKV
VREAIRVSEP KYSIKNLEAF YMEKRDAEVA TAGDSIVVYE EWRQSQDPQL LQNISDYNED
DCRSTLLLRD WLLTLRAADM PWFDLTAGAP SEEKLQAQQD AEENRVRYEQ NLTRGHEGQD
YEFRELVAQL LDFHRREAKP QWWAMFDRQE RTDEELVDDA ECLGGLKADP NQPPYKEKRS
MVYTYRFPAQ VTKLKKGSQC LRADSLESAG TIVDLSWDQR TVSIKKGPKG GPLPDVLSIT
PPGPINNSVL KDAVYRFADA IIAGSGKYQA LASFLRRGKP EIAGHEADTP IVPDGDNSLP
AIFEAVGNLQ NSFLFIQGPP GAGKTYTSSH VIVELLRRGK RIGISSNSHK AINNLLDGIE
KAAIKEGITF RGQKKCSASN PDSVYLGEMI ESVSDNGGMD PESDIIAGTA WLFARDEYHE
VLDYLFIDEA GQVSLANLVS MGLSARNIVL VGDQMQLGQP IQGTHPGDSG MSILDYLLEG
ESTIPADRGI FLGTTWRMHE NVCRFISDAV YEGRLHPEAG TRNQALILSE SAHPELRPNG
IRFIEAKHEG CSQKSEEEGR IIQELIASLL EQRYRDRDGN EHSVAPDNIL VVTPYNVQVN
YLASILPEGV QVGTVDKFQG QEAEVVIISM VTSGAEDLPR DIEFLYSKNR LNVAISRART
LAMIVANPNL LEIPCQTVEQ MRLVNTLCWV KSCSAE
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