| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1256 |
|---|
| Symbol | |
|---|
| ID | 4481851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1549656 |
|---|
| End bp | 1549901 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639721999 |
|---|
| Product | post-segregation antitoxin CcdA |
|---|
| Protein accession | YP_865173 |
|---|
| Protein GI | 117924556 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.643497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.197601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACTT CTCAAACTGA AAGCGCCAAG AAAGATCGCG TCAATCTAAG CATGAACAGT
GAGCTTGTTC AGAAGGCAAA AGCGCTCAAC ATCAACCTTT CCAAAGAGCT GGAGAAGCAC
CTGGATAAAT TGGTTGCGGA ACGCCAGCAA CAGGTATGGA AAGAGGAGAA CCAAGAGGCC
ATCAAGCAGT ACAATTCACG TGTGTTAACC GATGGCCTCT TTGGCGATAA GCTGAGGCAG
TTCTAA
|
|---|
| Protein sequence | MHTSQTESAK KDRVNLSMNS ELVQKAKALN INLSKELEKH LDKLVAERQQ QVWKEENQEA
IKQYNSRVLT DGLFGDKLRQ F
|
|---|
| |