| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1250 |
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| Symbol | |
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| ID | 4481845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1547248 |
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| End bp | 1547463 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639721993 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_865167 |
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| Protein GI | 117924550 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.124236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.203788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATC GCATTACCGG TACAGTGAAA TGGTTCAATA ATGACAAGGG GTTCGGTTTT
ATCGCCCCTG ATAATGGTTC CAAGGATGTT TTTGCTCATT TTTCTGAGAT ATCTTCTGGC
AGTGGGTTTA AGTCTCTTGA AGAGGGACAA AAAGTTGAAT TCAGCGTGGA ACCAGGGGAT
AAAGGTCCGA AGGCCGTGAA AATCACCTCT CTTTGA
|
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| Protein sequence | MADRITGTVK WFNNDKGFGF IAPDNGSKDV FAHFSEISSG SGFKSLEEGQ KVEFSVEPGD
KGPKAVKITS L
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