Gene Mmc1_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1240 
Symbol 
ID4484120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1541444 
End bp1541944 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID639721983 
Producthypothetical protein 
Protein accessionYP_865157 
Protein GI117924540 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.120943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTC AGAGTTTGCC CCATCGGGGC ACAGATGAAA ACAGGACAGT GTTGGCCCTG 
GATCTTGGTA CCCAGTTGGG GTGGGCGCTG CACCACCCCG ATGGGACCAT CACCAGCGGC
ACGGTGTCGT TCAAGCTGGG CAGGTTTGAA GGGGGCGGTA TGCAGTGGGT CAGGTTCAAG
GCCTGGCTGG ATGAGATGCA CTTCACCAGC GATGTAGGAC AGATCCTGTT TGAGGAGGTG
CGCAGGCATA TCGGAACGAC AGCGGCCCAT GTGTATGGCG GATTCCTGGC CCACCTCACA
GCCTGGGCAG AGCACCATGA GGTGCCCTAC ATGGGGGTGC CCGTGGGCAG CATCAAAAAA
TCAGCTACGG GCAAAGGCAA CGCCAGCAAG GAGCAGGTGA CTCACGCCAT GAAGCGCCTG
GGATACACCC CGGAGGATGA CAACGAGGCC GACGCTTTGG CCCTGCTGCA TTGGCAGATC
GACCAGGGAG GTGCGCGATG A
 
Protein sequence
MATQSLPHRG TDENRTVLAL DLGTQLGWAL HHPDGTITSG TVSFKLGRFE GGGMQWVRFK 
AWLDEMHFTS DVGQILFEEV RRHIGTTAAH VYGGFLAHLT AWAEHHEVPY MGVPVGSIKK
SATGKGNASK EQVTHAMKRL GYTPEDDNEA DALALLHWQI DQGGAR