Gene Mmc1_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1238 
Symbol 
ID4484118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1538180 
End bp1538956 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content57% 
IMG OID639721981 
Producthypothetical protein 
Protein accessionYP_865155 
Protein GI117924538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGT TGGATTATAA TCACAACGGT GGGGGCATCG CCCCCGCCAT CAATCATCTG 
ATTGATGAGG CTTTGGAGGT GGAAAACCGC CAACAGACCC CTCGCACCTA TCTGGGCGCA
TCCCGTTTAG GAGTGGCTTG TGAACGGGCG CTGCAGTTTG AGTACGCCCA TGCTCCCAAG
GATACGGGGA AGGATTTTGA TGGGCAGCTC CTGCGCATTT TCGCCGCTGG ACACCTGTTT
GAGGATATGG CGATTCGCTG GCTGCGCATG GCTGGATTCG AGCTCTTCAC CACCAAGGGT
AATCGCCCTA ATGGCGAGCA GTTCGGCTTC GAAGCCGCTG GCGGTCGGAT TCAGGGCCAC
GTAGACGGGA TCATCGTGTC TGGCCCAAAC AGCATCAGCA TGGGTTACCC CTGTCTATGG
GAGTGCAAGT CCCTCAACAA TAAATCCTGG AATGACACTG TAAAGCGCGG GGTGGCCCTC
TCCAAGCCGG TATACGCAGC CCAGGTCGCC ATCTATCAGG CATATATGGA GCCCCAGGTA
GGGGGCATCT CGGCCAACCC GGCGCTGTTC ACCGCCATCA ACAAGGATAC GTCCGAAATC
CATCACGAAC TGGTGCCTTT TGATGCCCCA CTTGCGCAGA AGATGTCCGA TCGCGCTGTG
CGCATCATCA AAGCCACAGA GGCCCATGAG CTACTACCCC GGATCAGCCG GGAGTCGACA
CACTTCCAGT GCCGTATGTG TAGCTGGGCA GATCGCTGCT GGAGTCTATC AGCATGA
 
Protein sequence
MTMLDYNHNG GGIAPAINHL IDEALEVENR QQTPRTYLGA SRLGVACERA LQFEYAHAPK 
DTGKDFDGQL LRIFAAGHLF EDMAIRWLRM AGFELFTTKG NRPNGEQFGF EAAGGRIQGH
VDGIIVSGPN SISMGYPCLW ECKSLNNKSW NDTVKRGVAL SKPVYAAQVA IYQAYMEPQV
GGISANPALF TAINKDTSEI HHELVPFDAP LAQKMSDRAV RIIKATEAHE LLPRISREST
HFQCRMCSWA DRCWSLSA