Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1215 |
Symbol | |
ID | 4481208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1511604 |
End bp | 1514438 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639721958 |
Product | periplasmic sensor hybrid histidine kinase |
Protein accession | YP_865132 |
Protein GI | 117924515 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.960151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.101285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA TGCCTCGATC CTTTAGGCGC TCCATTGGCA TCCGTATTTT ATTGGGCTTT TCCCTGATCC TTGCACTTAT TGTGGCCCAA TCCATGGTCA CCAATCTAAG CCTTGATCGG GCGATCTATC ATTTCAAACA GTATGGACAA ACCAACAGCC ATCTTCGCGA AATCCTCACC CTAGAACGCA ATGTACTGGA TCTACACCGG GGTGTATTGG CTTACACCTA TTCTGGTTAT GAAGGTTTAG CCCATCGGGT TAAGGAGATG CAACAGACCA TCTCCCGGCA AATGGACGAA GCCCGCAGCC GAGTTAAAGA CCCTCAACGC GCCGCCCTAT TGGCCCAGAT GGATGCCCAT TTTAAGCTCT ATGCTGAAAA TTTTGATACG GCGATTGAAG AGCGCTTATT GCGTGACAAA ATGGCTTTTG AGCAGTTAGA GGATGGCGGC GATCAGGTAT TACTGCGACT CAATGCCCTA CACAGCCAAT TGCTCAACAA CCAAGATAGG CAAGGGGCCG AACGGGTTGA TCATGCCCTT GTGCAACTGG CTTTGGTGCA GCGCAATGCC ATGCGTTTTT TAATTAAACC CAATGCCCGT TTGGTGGCGA ATACCAATCA ACATCTCAAA CAACTTAATC AAGAATTACT TGAACTTAGC AACCACAATA GCCCATTGAT AGCCTCGACT CAATCTCAAG AACTTACCGA GTTAACCCAA TCTTTTCAAA GAAACTTTAA TAAAATGGTG CAAGCTTCGC GGGCTTACCT GCACCTGATT TATGTGGTAA TGGGGGGCGA GGCTTCTCAG ATCGCATATC TGGCCAATCG CTTAAAACAG CTCTCTGAAC AGCAACAAGG GGTCGTGGAA CAGCAGATGG ACATTGCGGT TCACGAAACG CTGCAAATCA CCCGTGGGGT ATCGCTGTTA GGCATTATGT TAGGCATTTT TTTAGCGTGG CGCATTGGGC GCAACATCTC TCAGCCCATT CACGCCATGA CTGTTGCCCT TACGGGGTTG GCCCGTGGCA AGCAAGATAT TGAGATCCCT GGACGTGGCC GCAGTGATGA GATCGGTGCC ATGGCCATGG CGGCGGACGT CTTTAAGGTC AAAGCCCATG AACTTGCCAA TGCCAGCCGC TATAAGTCGG AATTTTTGGC CAACATGTCC CACGAGTTAC GCACCCCGCT GAACAGTTTG CTGATCCTCG CTAAAATGCT CAGTAACAAT GAAGAGGGCA ATTTATCGGA AGACCAAGTG GAATCGGCCC AGGTTATCTA TGAAAGTGGG CGCGATTTAT TGCACTTAAT TAATGATATT CTGGATCTAT CCAAGGTGGA AGCCGGGCGC ATGGATCTCT ATGTCGAGAG CCGTCCTTTA CAGGCATTGC CACAGATGCT TGAGCGCACC TTTAAACCCG TTGCCCAGCA AAAATCCCTG GCGTTTCATT GGAGCATCGC CGACGACCTG CCCAAAGAGT TGGCCACCGA CTGGCCCAAA GCGGAACAGG TGGTGCGCAA CTTTCTGTCT AACGCCTTTA AATTTACCGA GAGTGGTCAT GTGACGGTCG CCATCCACAA GCCCCAAGCC CATCGTATCT TTATGAACAG TGATTTAACC CATAAAAACG CGCTTATGAT CTCTGTAACC GATAGCGGCA TCGGTATCGC AGAAGATAAA CGCGAGCTTA TTTTTGAAGC CTTTCGCCAA GCGGACGGCA CCACCAGCCG CGCCTATGGT GGCACGGGGC TAGGGTTGAC CATCTCCCGT AAATTTGCGG CGCTTCTGGG GGGCGAAATC CAGGTAGAGA GCGCTCCTGG CAAAGGCTCT TGTTTTACGC TTATCCTTCC TCTGGAGAGC CCAAACCTGG AACACCAAGC AGGGAGGGGG GAGCAGATGG AACCAGAAAA CCCCCTAAGC CCCAGTGAAC AGGTGGAGGC CATCACTCAC TTTAGATCCC ACACCACCAC CCTGTTGGTA GTGGATGATG ACCGGCGCAA TGTGTTTGCG CTTAAAAAAA TGTTGGAAGA TCGGGTGGGG TTGGTGCTCA GCGCTTATAA TGGCAAACAG GCGTTGGATG TACTGAGCCA ACACCCCGAA GTCGACCTAG TGTTTATGGA TATTATGATG CCGGAGATGG ACGGATATGC GGCCATTGAG GCCATTCGCC GGCAGCCCCA CCTTCAACAC CTGCCCATAC TGGCGCTTAC CGCACGCGCG ATGCCTGGGG ACCGGGAGCT CTGCCTTAGC CACGGTGCCA ATGGTTATCT CTCCAAACCG GTAGAGAGCG ATGCTCTGTT CCAAGCGCTT ATCACTTGGC TTGCCCCCAA CCCAGAGCAA GCCAAACCTG ACACCAAACC CATAAAATCG TTCACTAACA CACTCTCACA TAGGCAACGC CCTGACGAAA ACGAACCTGA AAGTACCGAA CAGGTTGCAC CGTTAGGTAC CCCCCCCATT CAGATTTTGA TTGTCGATGA TGATATGCGG AATACCTTCT CTTTGGCGCA TAGCTTACAA AAGCGGGCCG ATAAGGTGTT TATTGCCCGG GATGGGGAGA AGGCGATTGC GGAACTGGAG AAGCACCCTC AAATCAACTG CGTGCTTATG GATATCATGA TGCCCCATAT GGATGGTTAT GAGGCGATGC GGCGCATACG GCAGGATCAA CGTTTTGCCC AACTCCCCAT CATCGCCCTG ACCGCCAAGG CTATGGAGGA AGATCGACAA CAATGTCTAG CTGCTGGGGC GAGTGACTAT TTATGCAAAC CCGTTGCCCT AGATAAGCTT ATGGATAGCA TGCGCACCCT CATTGCTAAC CAGCAGCAAG AATAA
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Protein sequence | MFSMPRSFRR SIGIRILLGF SLILALIVAQ SMVTNLSLDR AIYHFKQYGQ TNSHLREILT LERNVLDLHR GVLAYTYSGY EGLAHRVKEM QQTISRQMDE ARSRVKDPQR AALLAQMDAH FKLYAENFDT AIEERLLRDK MAFEQLEDGG DQVLLRLNAL HSQLLNNQDR QGAERVDHAL VQLALVQRNA MRFLIKPNAR LVANTNQHLK QLNQELLELS NHNSPLIAST QSQELTELTQ SFQRNFNKMV QASRAYLHLI YVVMGGEASQ IAYLANRLKQ LSEQQQGVVE QQMDIAVHET LQITRGVSLL GIMLGIFLAW RIGRNISQPI HAMTVALTGL ARGKQDIEIP GRGRSDEIGA MAMAADVFKV KAHELANASR YKSEFLANMS HELRTPLNSL LILAKMLSNN EEGNLSEDQV ESAQVIYESG RDLLHLINDI LDLSKVEAGR MDLYVESRPL QALPQMLERT FKPVAQQKSL AFHWSIADDL PKELATDWPK AEQVVRNFLS NAFKFTESGH VTVAIHKPQA HRIFMNSDLT HKNALMISVT DSGIGIAEDK RELIFEAFRQ ADGTTSRAYG GTGLGLTISR KFAALLGGEI QVESAPGKGS CFTLILPLES PNLEHQAGRG EQMEPENPLS PSEQVEAITH FRSHTTTLLV VDDDRRNVFA LKKMLEDRVG LVLSAYNGKQ ALDVLSQHPE VDLVFMDIMM PEMDGYAAIE AIRRQPHLQH LPILALTARA MPGDRELCLS HGANGYLSKP VESDALFQAL ITWLAPNPEQ AKPDTKPIKS FTNTLSHRQR PDENEPESTE QVAPLGTPPI QILIVDDDMR NTFSLAHSLQ KRADKVFIAR DGEKAIAELE KHPQINCVLM DIMMPHMDGY EAMRRIRQDQ RFAQLPIIAL TAKAMEEDRQ QCLAAGASDY LCKPVALDKL MDSMRTLIAN QQQE
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