Gene Mmc1_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1202 
Symbol 
ID4481195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1497890 
End bp1498780 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID639721945 
Productnitrogenase iron protein subunit NifH 
Protein accessionYP_865119 
Protein GI117924502 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.451718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00669218 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACTGC GTCAATGCGC AATTTACGGC AAAGGTGGTA TCGGCAAATC CACCACTACC 
CAGAACCTCG TTGCGGGTCT GGCCGAAGCT GGTAACAAAA TCATGATCGT TGGCTGTGAC
CCCAAAGCGG ACTCCACCCG CCTTATTCTG CACGCCAAAG CGCAAAATAC CATCATGGAA
ATGGCTGCTC AAGCGGGTTC TGTGGAAGAC CTGGAATTGG AAGATGTGCT GAAGGCTGGT
TTTGGCGGCA TCAAGTGTGT TGAGTCCGGC GGTCCTGAGC CTGGTGTGGG TTGTGCAGGC
CGTGGTGTTA TCACCGCCAT CAACTTCCTG GAAGAAGAAG GCGCTTACGA AGAAGATCTG
GACTTTGTGT TCTATGATGT GTTGGGTGAC GTGGTGTGCG GTGGTTTCGC CATGCCCATT
CGTCAAAACA AAGCTCAAGA GATCTACATT GTGGTCTCCG GCGAGATGAT GGCCATGTAC
GCCGCCAACA ACATCGCCAA AGGTATTGTG AAGTATGCAA GCTCCGGCAA CGTGCGTCTG
GCTGGTCTGA TCTGCAACTC CCGTAACGTG GACCGTGAAG ACGAGCTGAT CGAAGCGCTG
GCCGCTGCCC TTGGCACCCA GATGATCCAC TTCGTGCCCC GCGACAACGT GGTGCAACGC
GCTGAGATCC GTCGTATGAC TGTGATCGAG TATGATCCCA AGTCCAAGCA AGCCGACGAG
TATCGCACCC TCTCCAACAA GATCTACAAC AACAAAAACT TTGTTGTGCC CACGCCCTTG
ACCATGGATG AGTTGGAAGA TCTGCTCATG AAGTACGGCA TGATGGAAGA AGAGGACGAA
ACCATCGTCG GTAAGACGGC TGAAGAAGAA GCCGCTGCCG CCACTGCCTA A
 
Protein sequence
MALRQCAIYG KGGIGKSTTT QNLVAGLAEA GNKIMIVGCD PKADSTRLIL HAKAQNTIME 
MAAQAGSVED LELEDVLKAG FGGIKCVESG GPEPGVGCAG RGVITAINFL EEEGAYEEDL
DFVFYDVLGD VVCGGFAMPI RQNKAQEIYI VVSGEMMAMY AANNIAKGIV KYASSGNVRL
AGLICNSRNV DREDELIEAL AAALGTQMIH FVPRDNVVQR AEIRRMTVIE YDPKSKQADE
YRTLSNKIYN NKNFVVPTPL TMDELEDLLM KYGMMEEEDE TIVGKTAEEE AAAATA