Gene Mmc1_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1198 
Symbol 
ID4480514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1493539 
End bp1494222 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content56% 
IMG OID639721941 
Productdinitrogenase iron-molybdenum cofactor biosynthesis 
Protein accessionYP_865115 
Protein GI117924498 
COG category 
COG ID 
TIGRFAM ID[TIGR02663] nitrogen fixation protein NifX 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.127129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000500892 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAGA ATACCGAACT TGCCCTGCGT ATGGGTGTTG CTGCCAAGCA GATTACCGGC 
TTGGAGCCCA AGGCGCTGGT TGCCATTTTG CAAGAGTTGG TGGAGCTGCC CTTCACCCCC
TTAAAATTTT CCCAGCTTCG TTTGGCCGAC TTGAGCCAAG CCCTTGGTGA TTCTGCGGAT
CCAGCACAGG TTCAAGCTGC CCACAAAATT TTGGTGGAGG GTTTGGATCC ACAGATTGTG
GAGACCCTGA GCGCTCAGGA CGCCAAGATC CCTCGCGAAC CCAACGCGGT ACGGGTGGCT
TGTGCCAGTT CTACACCGGG GCAGACCGAT GGCCACTTTG GCGGATGTAA GGCGTTTGAA
ATTTACGACG TCTCCCCCGG TGCCGTCACC CTGGTGGAGA GCCGTTCAAC CCTACATTTA
ATCGCCGAAA AGATCACCGA TGATCCTGCT TACAAGAGTG ACCCACGGGT TGCCTTGATC
AATGATTGTG ATCTGGTCTT TGTGGTGAGC ATTGGGGGTC CTGCCGCCGC CAAGGTGGTC
CGGGCGGGCA TGCATCCCAT GAAATTTGCC GAAGGTGGAT CGAGTGAAGC GCTGTTGGCC
GATCTGCAAC AGACCCTCAC CAACAACCCC CCACCTTGGT TGGCGAAGGT GATGGCGGGG
AGTGTGACCC AACAACAGGC GTAA
 
Protein sequence
MAKNTELALR MGVAAKQITG LEPKALVAIL QELVELPFTP LKFSQLRLAD LSQALGDSAD 
PAQVQAAHKI LVEGLDPQIV ETLSAQDAKI PREPNAVRVA CASSTPGQTD GHFGGCKAFE
IYDVSPGAVT LVESRSTLHL IAEKITDDPA YKSDPRVALI NDCDLVFVVS IGGPAAAKVV
RAGMHPMKFA EGGSSEALLA DLQQTLTNNP PPWLAKVMAG SVTQQQA