Gene Mmc1_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1193 
Symbol 
ID4480509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1488146 
End bp1488586 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID639721936 
Productdinitrogenase iron-molybdenum cofactor biosynthesis 
Protein accessionYP_865110 
Protein GI117924493 
COG category 
COG ID 
TIGRFAM ID[TIGR02663] nitrogen fixation protein NifX 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000688158 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGACCAGC AAAATCATGA AGGGCTAAGT GTCGCCTTTG CCACGGCGGA TTTAAACCGG 
GTCGATCAGC ATTTTGGTAC CGCCCTGAAG TTGGCCCTCT ACCGCATCAC GCCAGAGACG
GCCAAATTGA TGGAGGTGGT GGCCTTTGCT TCGGAAGAGA TGGATGGTAA CGAAGCCAAG
CTGCCCGCCC GCCTTAATGC GTTGAGCGGC ATTCAAGCGG TTTACTGCAT GGCGGTGGGG
GGTTCAGCGG CGCGGCAGTT GATTGCAGGG GGTACCACCC CAATCCGCTT GGATGAGAGC
ATGCGCATCG AGACGCTGAT TAGCGAAATA CAGCACAAAA TGACCCATGA TCCAGCCCCC
TGGATGAACT GGGTCAAACG TAAACAGGAT AAAGAAGCCT GTGATTTTGA AGAAGTGTTG
AACGAGAGCT GGGAAGAGTA A
 
Protein sequence
MDQQNHEGLS VAFATADLNR VDQHFGTALK LALYRITPET AKLMEVVAFA SEEMDGNEAK 
LPARLNALSG IQAVYCMAVG GSAARQLIAG GTTPIRLDES MRIETLISEI QHKMTHDPAP
WMNWVKRKQD KEACDFEEVL NESWEE