Gene Mmc1_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1192 
Symbol 
ID4480508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1487654 
End bp1488103 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID639721935 
Producthypothetical protein 
Protein accessionYP_865109 
Protein GI117924492 
COG category 
COG ID 
TIGRFAM ID[TIGR02935] probable nitrogen fixation protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000719142 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGAAG AAGAGCTGTA TCAGTCGGAC TTTTTTCTAG AGATGGTTAA GCAAATGCGC 
GCCCTAGACA CCTATGGGGT GCAAGACAAA CAGACACCGC AAAAGTTGAT GGCTCCTTTT
ATCATCAGCA AAGAAGCCCG CAAGCTTATT CCTGTGATTG GGGATCCTGA TCCTTCCACC
ATCTCCCGCG TGGCGGCTTT TTATAATGCC ATCGCGATGT TGATTGAAAA AGAGTGCGGT
TTGATGGCAC GTCCCTCCAT CAACATCACC CATGAGGGTT TTGGCACAGT CCATATCATT
GTAGGCAAAT TGGTGGCACT GGAACGGGTG GTGCGGGATA TTCACCGCTT TGGCTTTGAG
ACCCCCTCTA AAATGAAGGA TGAAGGGGAC AAGTTACTCA GTGTTGCACT AGCCCTAATT
GGCAAACACC CAGAGGTAGC GGGGCTGTAA
 
Protein sequence
MSEEELYQSD FFLEMVKQMR ALDTYGVQDK QTPQKLMAPF IISKEARKLI PVIGDPDPST 
ISRVAAFYNA IAMLIEKECG LMARPSINIT HEGFGTVHII VGKLVALERV VRDIHRFGFE
TPSKMKDEGD KLLSVALALI GKHPEVAGL