Gene Mmc1_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1189 
Symbol 
ID4480505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand- 
Start bp1485536 
End bp1486081 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content52% 
IMG OID639721932 
ProductNifZ family protein 
Protein accessionYP_865106 
Protein GI117924489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.0000688158 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACACC AAGAGTATGA AGAGATTGCC GGTAACTACC GGTTTGAAAA TGCCAGCGCG 
GTACGGTTGA TTAAGTCCAT CCGCAACGAT GGCACCTTTC CTGGCAAACG CAGTGGCGAG 
GTGCTGGTGC GCAAGGGAAC CGTGGGTTTT GTGCGTCAGG CTGGGGTTTT TTTGCAGGAG 
CACAATATCT ACGAAATTCA CTTTATCGAC GATGACTTGA TTGTCGGTTG CCGTGAAAAA 
GAGCTACAAG ACGCCGAACT GCCCTGGGTA GAGAGCCTGT TTGAGACCCG TGATCGGGTT 
ATGCTGGCAG TGCCGTTGGA GATCAAAGGG GAGACCCTGG TTGACACCGA TCAGGTTGGG 
GAGGTGGTGG AGGTCAATAG CAGCAACCCC GACAAAATTG TCTGTCAGGT CCACTTTGGC 
GAGCGCTATT TTAATATCCC AGAGAAGCTG CTGGTCATGG CGCCGGAGTT GGACAACCAA 
CCCGATTATG AGTTTAACCA GACCCAGAAA ATGATGATGG GCCTGCTACC AACCGCCCAA 
TCTTGA
 
Protein sequence
MQHQEYEEIA GNYRFENASA VRLIKSIRND GTFPGKRSGE VLVRKGTVGF VRQAGVFLQE 
HNIYEIHFID DDLIVGCREK ELQDAELPWV ESLFETRDRV MLAVPLEIKG ETLVDTDQVG 
EVVEVNSSNP DKIVCQVHFG ERYFNIPEKL LVMAPELDNQ PDYEFNQTQK MMMGLLPTAQ 
S