Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1184 |
Symbol | |
ID | 4480500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1483025 |
End bp | 1483690 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721927 |
Product | molybdate ABC transporter, inner membrane subunit |
Protein accession | YP_865101 |
Protein GI | 117924484 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4149] ABC-type molybdate transport system, permease component |
TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.548615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000438991 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTGGGATG CCATCTCACT GACCCTTAAA CTGGCTTTTA TCACCACCCT CATTTTAATG TTGGTGGGCA CCCCTATTGC GTGGTGGCTC TCTCAAAGCA AAGCACGTTG GAAAGAGCTG GTGGGCACAG TGATCGCCCT GCCCCTGGTG CTCCCCCCCA CCGTGTTAGG TTTTTACCTG CTGCTATTGA TGAGCCCGGA TAGTCTGTTG GGGCAACTGG TTAAACATCT GTTTGGCACC ACCCTACCCT TTACCTTTGC CGGTCTGGTG GTGGGCTCCA CGCTCTACTC GCTGCCCTTT GTGGTCCAAC CCATCCGCAA TGCCATGGAG GCCATGGGCG AACGCCCGCT GGAGGCCGCC GCCACCCTAC GCGCCTCACC CTGGGACTGT TTTATCCATG TGGTATTGCC CTTGGCACGT CCCGGCTTTT TAACCGGGGC TGTCTTGGGC TTTGCCCACA CGGTGGGGGA GTTTGGGGTA GTGTTGATGA TTGGCGGCAA TATTCCCGGC GAGACCAAGG TGCTGTCGGT GGCCATTTAT GATTATGTGG AGACCCTGGA GTGGGACAAA GCCCATCTGC TGGCTGGGGG GATGTTGCTG TTTGCCTTTG TGGTGATCTG GAGCATGACC AGCTTTGAAA AACGGTTGGG GAGAAGCCTG CGATGA
|
Protein sequence | MWDAISLTLK LAFITTLILM LVGTPIAWWL SQSKARWKEL VGTVIALPLV LPPTVLGFYL LLLMSPDSLL GQLVKHLFGT TLPFTFAGLV VGSTLYSLPF VVQPIRNAME AMGERPLEAA ATLRASPWDC FIHVVLPLAR PGFLTGAVLG FAHTVGEFGV VLMIGGNIPG ETKVLSVAIY DYVETLEWDK AHLLAGGMLL FAFVVIWSMT SFEKRLGRSL R
|
| |