Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1177 |
Symbol | |
ID | 4482439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1477883 |
End bp | 1478707 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639721920 |
Product | hypothetical protein |
Protein accession | YP_865094 |
Protein GI | 117924477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.289963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0134976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCAG CATCCAACAG CAGAGCCGCC GCCCGCACAA CACCGTTGCG GGGGATTGTC CATGCCCACT CCAACCACTC TTTTGATGGC ACCCTGAGTT ATGCCCAGCT GCGCACCCTG CTGCTGGGTG AAGGGTTACA CTTCGCCTGC ATGACCGAAC ATATCGAGGG GTTGGATCAA GCCAAGGTGG AGGCCATTAT CCAGCAGTGT CACGACCACT CCGACGCCGC GTTTCTGTTT ATTCCCGGCA TTGAGATGGA CTGTTTTACC ATTGCCTTTT TGGGGATCAG CCCCTGCGCC ATTGATTTTA CCAGCAATGC GCAGATCGCC CAATCGCTGC ACCCCCATGC GGCCATGCTC ATACTCACCC ACCCCATCAA GGCCCGTTTT AACCCTGCCC CACCGTGGCA ACAGTGGTGT GATGGGGTGG AGATTCTGAA TAGCCGCCAC GATGGCCGCC ATGGTGTGCG TCCACAAAGT TTGCAGTTAT GGCAAACCAT CCAGGCCCAG CGCCCCAACG TGGTCCCCCT GGCCGCGTTG GATCTGCACC GGGTGGGGGA TCTGCAACCG GTCATCATGC AGCTCCCCCC AGGCCCGTTA ACCCCTGCGT GGGTGCTCAG CCAACTTAAA CAGGGGGCTG GAGTGCCCAT GTTGAACGGG CAAGCGCTGC TCAAGCGCCC GCCTATGGCG CAACATCTCG CCAGGCTCCG CATTGGGGTG ATGGATCTGG CCCACCACTG CCACCACTGG TTGACAGAAC GGGGCGTGCG GCTGCCCAAG GGGCTAAAAC GCATGCTGCG CCGCTGGCTG GAGGGCAAAG CGTGA
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Protein sequence | MEAASNSRAA ARTTPLRGIV HAHSNHSFDG TLSYAQLRTL LLGEGLHFAC MTEHIEGLDQ AKVEAIIQQC HDHSDAAFLF IPGIEMDCFT IAFLGISPCA IDFTSNAQIA QSLHPHAAML ILTHPIKARF NPAPPWQQWC DGVEILNSRH DGRHGVRPQS LQLWQTIQAQ RPNVVPLAAL DLHRVGDLQP VIMQLPPGPL TPAWVLSQLK QGAGVPMLNG QALLKRPPMA QHLARLRIGV MDLAHHCHHW LTERGVRLPK GLKRMLRRWL EGKA
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