Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1166 |
Symbol | |
ID | 4482428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1467094 |
End bp | 1467837 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721909 |
Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
Protein accession | YP_865083 |
Protein GI | 117924466 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0201131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.113287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATC GCGTCGCGAT GGTGTCTGGT GGTGCCGGTG GCATTGGTAC CGAGATTGTG CGCAGCTTGC ATGCCCAGGG TTACAAGGTG GCCTCCACCT GTACGGTGAT GGAGTGCGCC CGCGTACAAC AGTGGAAAAA AGAGCGTGAG CTTGAGCATG TGGAAGTGGT GATGGTAGAA GTGGATGTAC GCAATTATGA ATCCTGCCTC AAAGGGGTTG AAGAGGTTGA GAGCCGCCTT GGACCCATCG ACGTATTGGT CAACAATGCG GGCATCACCA AAGATGGGGT GATGAAAAAG ATGAGTCCCG AGCAGTGGCA GAGCGTGATT GATGTCAACC TGACCGGTAC CTGGAACATG ACCAAAGCGG TGTTGGATGG TATGTTGGAG CGCCAGTATG GGCGGATTAT CAACATCTCA TCGGTCAATG GTCAAAAGGG GCAGTTTGGG CAGGTTAACT ATGCGGCGGC CAAGGCTGGC ATGCATGGCA TTACCATGTC ATTGGCCCAA GAGGTGGCTC GTAAGGGGAT CACCGTGAAC ACCGTCTCCC CTGGCTATAT TGGCACCGAT ATGGTGATGG CCATTGATGA GGAGATTCGT AACAAAATCA TTGCCACCAT CCCGGTAGGC CGTTTGGGTA AGCCCGAAGA GATTGCCCGC CTTGTGACAT TTTTGGCGGC AGAAGAGTCG GGCTTTATGA CCGGGGCCGA TTTTTCCATC AATGGGGGCA TGTACACCCA CTAA
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Protein sequence | MKDRVAMVSG GAGGIGTEIV RSLHAQGYKV ASTCTVMECA RVQQWKKERE LEHVEVVMVE VDVRNYESCL KGVEEVESRL GPIDVLVNNA GITKDGVMKK MSPEQWQSVI DVNLTGTWNM TKAVLDGMLE RQYGRIINIS SVNGQKGQFG QVNYAAAKAG MHGITMSLAQ EVARKGITVN TVSPGYIGTD MVMAIDEEIR NKIIATIPVG RLGKPEEIAR LVTFLAAEES GFMTGADFSI NGGMYTH
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