Gene Mmc1_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1166 
Symbol 
ID4482428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1467094 
End bp1467837 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content53% 
IMG OID639721909 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_865083 
Protein GI117924466 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0201131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATC GCGTCGCGAT GGTGTCTGGT GGTGCCGGTG GCATTGGTAC CGAGATTGTG 
CGCAGCTTGC ATGCCCAGGG TTACAAGGTG GCCTCCACCT GTACGGTGAT GGAGTGCGCC
CGCGTACAAC AGTGGAAAAA AGAGCGTGAG CTTGAGCATG TGGAAGTGGT GATGGTAGAA
GTGGATGTAC GCAATTATGA ATCCTGCCTC AAAGGGGTTG AAGAGGTTGA GAGCCGCCTT
GGACCCATCG ACGTATTGGT CAACAATGCG GGCATCACCA AAGATGGGGT GATGAAAAAG
ATGAGTCCCG AGCAGTGGCA GAGCGTGATT GATGTCAACC TGACCGGTAC CTGGAACATG
ACCAAAGCGG TGTTGGATGG TATGTTGGAG CGCCAGTATG GGCGGATTAT CAACATCTCA
TCGGTCAATG GTCAAAAGGG GCAGTTTGGG CAGGTTAACT ATGCGGCGGC CAAGGCTGGC
ATGCATGGCA TTACCATGTC ATTGGCCCAA GAGGTGGCTC GTAAGGGGAT CACCGTGAAC
ACCGTCTCCC CTGGCTATAT TGGCACCGAT ATGGTGATGG CCATTGATGA GGAGATTCGT
AACAAAATCA TTGCCACCAT CCCGGTAGGC CGTTTGGGTA AGCCCGAAGA GATTGCCCGC
CTTGTGACAT TTTTGGCGGC AGAAGAGTCG GGCTTTATGA CCGGGGCCGA TTTTTCCATC
AATGGGGGCA TGTACACCCA CTAA
 
Protein sequence
MKDRVAMVSG GAGGIGTEIV RSLHAQGYKV ASTCTVMECA RVQQWKKERE LEHVEVVMVE 
VDVRNYESCL KGVEEVESRL GPIDVLVNNA GITKDGVMKK MSPEQWQSVI DVNLTGTWNM
TKAVLDGMLE RQYGRIINIS SVNGQKGQFG QVNYAAAKAG MHGITMSLAQ EVARKGITVN
TVSPGYIGTD MVMAIDEEIR NKIIATIPVG RLGKPEEIAR LVTFLAAEES GFMTGADFSI
NGGMYTH