| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1148 |
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| Symbol | |
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| ID | 4482758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1434477 |
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| End bp | 1436381 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639721891 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_865065 |
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| Protein GI | 117924448 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0203006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA CCTGTAGTAA ACCCGCTCGA TTAGGCGATG AGACATCCGG TCTGGTGACG
GTCCGTAAGA TGGAGGTTGA CAAGGGTACA ACCGGATTAT GGTCTATCCA GAACTGGCCC
ATTAAGATAA AGATTCCTTT TATTTCATTT CTTGGTGTGG CGCTCATTCT TGTGGTCACA
GTGGCGTTTT TTCTCCCTTA TGTAGAGAGC CGCGTAATAG AAAGCGAGCA AAAAGCCACC
ATGCAGACGG TGGATGTGGT CTTTGGTATT TTGGAGCATT TTAACCAACT TGAGCTAAAT
GGGGTGTATG GCCGGGACGA GGCGATTAGC CACGCTAGGC AGTTGATTAA ACAGCTCCGT
TATCGCCAGG GCGACTATTT TTGGTTGCTG GATGAGAGCA GCCAAATGGT GCTGCATCCC
TTGCAACCCA ATCTGGAAGG TAAGCACCTT GCGGATATAG AGAGTGCCAG TGACCGACTT
TTTTATGAAG AGTCTCTCCA TGTTGCCCTT AATCGGTCCA GCGGGTTTGT CGAGCATCAG
CTTACCCAAC CTGACGATGA CACGGTCAAG ATGACCCAAT CTTATGTCAA ACGGTTTAAG
CCTTGGGGGT GGATTGTCGG CAGTGATATT GACCTTGCCG AAGTTGACCG TGTGGTCACC
GGTTTACGTC TTATCACCCT GGCCATGGCC GCCTTTTTTG CCATTGTGAC CATGCTGGTG
GCTTACCTGA TTGGTCAAGG GATTACCCAT CGTTTAATCC GCGTGATTGC CGGGTTGAAA
GATGTTGCCC AGGGCCGTGG CCATATCAAC CAATCCCACT GTATGCCCAT AACCTCAGCC
GATGAAATTG GCACGCTCTC CTTTGAGTTT AATGTGTTGA TGGACTCGAT CAAGGATCTC
GGCTGTTTTA GAAAATTGAT TGAGGAGGAT GAGACCTGCT CAGAGGTCTA CTCGCGGCTG
TGGGATGTGT TCACCGATAT AGGTCTAAAG GATGCGGTGA TCTATGAGGT GGATGAGTCG
CACAATTTGA TGAAAGCGGC CTACCCGCAT CAATTGCAGG CGAGCGATCT GCACTGTAGC
CCAGATATTT TGGATCAGTG CGGCCTGTGT AAAGCCAAAC GCACCGGTCA CACCATCTCC
TCCTTGGCCT TTCACAAGGT CTGTAAACAG TTTTTGCACC TGGATGAGGC CATGGAGTAT
GTCTGCATAC CCATGTCGGT GGGAGGGGGA ATCATCGGTG TGGTGCAGTT TATCTTTGAT
GAGCGGATCA AAGTATTAGA CCGTGATCTG CTTGCCAAGC AGGTTGATAA GGCGTCTCAA
TTTATTAAAG AGGCGCTACC GGTGATCGAA TCCAAACGGT TAACCGCCAC GCTGCGGGCC
TCGACCCTGG TTGACCCGAT GACCGGGCTG CATAATCGTC GTTTTCTGCA AGAGTGCGCC
AATAATCTCT GTTCGGGCAG TCAGCGGCGG GGTAAAAAAA TTGGCTTGCT TATGTGTGAT
CTAGACTTCT TTAAACAGGT CAATGATACC TATGGTCACG ATGTGGGCGA TAGTGTGCTT
AAAATAACCT CCGAAATTTT GCAAAACTCC GTGCGTCAAT CTGACCTGGT GGTGCGCTTT
GGGGGGGAGG AGTTTATTAT CATCTTGGTG GATATTGAAT CGGATGAAGT GATGGGGCTG
GCCGAAAAAA TTCGTAAGCA AATTGAAGCG ACCGAATTTC CCGTGCCGGG TAAACCCCCG
CTTAAAAAGA CCATCAGTAT CGGTATTAGC GTCTACCCAG ATGATGAAGA TGGCTTTTGG
AAAACCCTTA AATATGCGGA TGTCGCCCTC TATAAAGCCA AAGAAAATGG CCGCAATCAA
TCGGTACGCT TTACCAAGGA GATGTGGGAG GGGCAAGAGT ATTAA
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| Protein sequence | MTDTCSKPAR LGDETSGLVT VRKMEVDKGT TGLWSIQNWP IKIKIPFISF LGVALILVVT
VAFFLPYVES RVIESEQKAT MQTVDVVFGI LEHFNQLELN GVYGRDEAIS HARQLIKQLR
YRQGDYFWLL DESSQMVLHP LQPNLEGKHL ADIESASDRL FYEESLHVAL NRSSGFVEHQ
LTQPDDDTVK MTQSYVKRFK PWGWIVGSDI DLAEVDRVVT GLRLITLAMA AFFAIVTMLV
AYLIGQGITH RLIRVIAGLK DVAQGRGHIN QSHCMPITSA DEIGTLSFEF NVLMDSIKDL
GCFRKLIEED ETCSEVYSRL WDVFTDIGLK DAVIYEVDES HNLMKAAYPH QLQASDLHCS
PDILDQCGLC KAKRTGHTIS SLAFHKVCKQ FLHLDEAMEY VCIPMSVGGG IIGVVQFIFD
ERIKVLDRDL LAKQVDKASQ FIKEALPVIE SKRLTATLRA STLVDPMTGL HNRRFLQECA
NNLCSGSQRR GKKIGLLMCD LDFFKQVNDT YGHDVGDSVL KITSEILQNS VRQSDLVVRF
GGEEFIIILV DIESDEVMGL AEKIRKQIEA TEFPVPGKPP LKKTISIGIS VYPDDEDGFW
KTLKYADVAL YKAKENGRNQ SVRFTKEMWE GQEY
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