| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1141 |
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| Symbol | |
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| ID | 4482698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1426244 |
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| End bp | 1426978 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639721885 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_865059 |
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| Protein GI | 117924442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.46714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA TGATTGTCGG CGCATCGGCT GGACTTGGTC GCGCCTTGGC TGAACACTAT
GCGCAAAAGG GTCATCCGCT ACTGCTGATT TCATCCGATT CCCGCGATTG TGAACGGATG
GTTGCAGATC TGTCGTTACG TTTCGGTGTG CAAGTACGCT ATTTTGCCCA AGATCTTTCT
AATGGAGATT GGCCTTTTTC CGCCATTGAA GCACGGTTGT CCGAGCTCCC CCCGTTAAAA
GGGGTGCTAC TACCCGTTGG TTTTACCGAC GATGCCGACC TTCTGACGAT CGAACCCAAA
CAGCTTGAAA AAATTCTGCG CGTCAATTTT ACTTCAGTTG CTATGTTTAT TTCCCATTTT
CTACCGCACC TTCGATCAAC CCCCGGTTCC AAAATTGTGG CATTTGGCAG TATTTCCTCC
ATACGGGGAC GGGGGCGCAA CATCATCTAT TCATCCGCCA AACGAGCCTT GATCAGCTAT
TTTGAAAGTC TTGCCCATGG GTTAAACGAT CAAGGCCCCG CTGTGTGGCT GATTAACGTC
GGCTATTTAG CAACCAACCA ATCTTTCGCG CAACGCACCC TCCTCCCCCC TCAGGATCCT
CACCAACTGG CTAAGCTGGT ACAAATGTTG CCTTCCAATC GTTCAGGCAT ACGTTTTTGG
CCAGGATATT GGCGTTGGAT TGCCCTGATT CTGAGAATGA TCCCTTGGTT TATCTATAAA
AGATTATCTT TTTAA
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| Protein sequence | MTQMIVGASA GLGRALAEHY AQKGHPLLLI SSDSRDCERM VADLSLRFGV QVRYFAQDLS
NGDWPFSAIE ARLSELPPLK GVLLPVGFTD DADLLTIEPK QLEKILRVNF TSVAMFISHF
LPHLRSTPGS KIVAFGSISS IRGRGRNIIY SSAKRALISY FESLAHGLND QGPAVWLINV
GYLATNQSFA QRTLLPPQDP HQLAKLVQML PSNRSGIRFW PGYWRWIALI LRMIPWFIYK
RLSF
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