| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1133 |
|---|
| Symbol | |
|---|
| ID | 4482690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1417210 |
|---|
| End bp | 1418058 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639721879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865053 |
|---|
| Protein GI | 117924436 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.571519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGGG CAATGGATCA GGACGAAAAA CGAATGGAGG GAAGCGTGGT GTATGGAGTG
AAGGTGATGT GTATGGTGGT GATGGGGGTT GCATGGGCAG TCAGTGCTCA GGCGGCTGAG
AGGGACGTGA AGATGCCTGC CCCAGATTGT TTTAAACACC CTGTGGAAGG GGCCGTGTGC
AAAGAGCCCG CTGTTGGGAT GGCGTTTGTG TGGGTGCCTG GGGGCCGTTT TCAGATGGGT
TCCGATGATG GCCGTTCAAG CGAAAAGCCA CTACACCAGG TCACCCTGGA TGGATTTTGG
TTGGGCAAAT ATGAAGTGAC GCATGGTCAG TGGCGTGCTG TGATGGGTTT AAACTCGACC
GATTCCAAGA AGGGGGATGA TTATCCTGTA GAGGAAATTT CTTGGAACGA TGCGCAGCAG
TTCATCCTTA AAATGAACTC GAAGGGGCAG GGGGGGTTCC GGTTGCCCAG TGAGGCAGAG
TGGGAGTATG CGTGTCGGAG TGGTGGAAAG AAGGAGAAAT ATTCTGGATC ATCCAGTGCG
GACTCTGTGG CGTGGTACAA AAGCAACTCT GGGGCTGAGA CCCACCGCGT GGGGAGTAAG
GCTGCCAATG GTCTTGGTCT GCATGACATG AGCGGGAATG TGTTGGAGTT GGTCCAGGAT
GTTTTCGGCA GCTACAGCAG TGGCTTACAG CACAATCCAA TCTATGAGGG GAACGGTTCT
TACCGCGTGA GTCGTGGTGG TTCCTGGTAC TACAGTGCCA AGAATGTGCG TTGTGCCAGT
CGCGACCGTG ATGACCCAGG CGACAGGAGC AACAACCTCG GGCTGCGTCT CGCCAGGACG
GCACAGTAG
|
|---|
| Protein sequence | MRWAMDQDEK RMEGSVVYGV KVMCMVVMGV AWAVSAQAAE RDVKMPAPDC FKHPVEGAVC
KEPAVGMAFV WVPGGRFQMG SDDGRSSEKP LHQVTLDGFW LGKYEVTHGQ WRAVMGLNST
DSKKGDDYPV EEISWNDAQQ FILKMNSKGQ GGFRLPSEAE WEYACRSGGK KEKYSGSSSA
DSVAWYKSNS GAETHRVGSK AANGLGLHDM SGNVLELVQD VFGSYSSGLQ HNPIYEGNGS
YRVSRGGSWY YSAKNVRCAS RDRDDPGDRS NNLGLRLART AQ
|
|---|
| |