| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1127 |
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| Symbol | |
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| ID | 4481729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1412912 |
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| End bp | 1413781 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639721874 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_865048 |
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| Protein GI | 117924431 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.70947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGTACG CCTTTATTCA AGCTCATAGC AAAAGCTACT CTGTCGAGTC TTTATGCCGT
GTTCTGGATG TTTCTCGTAG TGGATTTTAT GGCTGGCTTA ATCGAACCAG TACGAGTAAG
GCTGAAGAGA ATCAACTGCT TGAAGAGTGG ATAGCAGAGA TTTTCAAGGT GAGTCGATCA
ACCTATGGAA CACGGCGTAT ACGCAAAGCG TTAAATGAGC ATGGTGTACG AGTGAGTCGC
CGACGCGTCT CCAGAATCAA GAGGAAGCTT GGCTTGGTTT GTAAAGCTCA GAAGCGTTAT
AAGGTTGTAA CGACAGATTC AAATCACGCA CTGCCTATAG CGCCTAACCT TCTTGATCGT
CAATTCGATA CGGAACGCCC TGATAACGCC TATGTTGGTG ACATCACATA TATTCCGACC
AAGGAAGGTT GGCTTTATCT GGCTGTTTGG ATTGACCTTT ATTCCAGAGC TGTTGTCGGT
TGGTCTATGG CAGACCCTAT GAAAGCAGAA CTGGTAACAG ACGCTTTACG CATGGCCTTT
TTCAAGCGCC GCCCAGAGGC CGGGCTGATT GTTCATAGTG ATCGTGGTAG CCAATATGCA
TCTGAACTCT TGAGAAAATA TCTGGATGAA AGAGGCTATA CACAGAGTAT GAGTCGCCGT
GGTAACTGTT GGGACAACGC ACCAGCAGAA AGCTTTTTCC ACACTCTCAA AGTTGAACTG
GTTTCATCCT GTGACTTTAA GACACGCGAT GAGGCTAAAC AGATCATCTT TGAATATATA
GAGGTCTTTT ATAACCGAAA GCGCAAGCAC TCATCCATCG GCTATATGAG TCCTTCTCAG
TACGAAATAG AGTGGTTCAA GTCCGCGTAA
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| Protein sequence | MRYAFIQAHS KSYSVESLCR VLDVSRSGFY GWLNRTSTSK AEENQLLEEW IAEIFKVSRS
TYGTRRIRKA LNEHGVRVSR RRVSRIKRKL GLVCKAQKRY KVVTTDSNHA LPIAPNLLDR
QFDTERPDNA YVGDITYIPT KEGWLYLAVW IDLYSRAVVG WSMADPMKAE LVTDALRMAF
FKRRPEAGLI VHSDRGSQYA SELLRKYLDE RGYTQSMSRR GNCWDNAPAE SFFHTLKVEL
VSSCDFKTRD EAKQIIFEYI EVFYNRKRKH SSIGYMSPSQ YEIEWFKSA
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