Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1079 |
Symbol | |
ID | 4482094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1318898 |
End bp | 1319986 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639721828 |
Product | GDSL family lipase |
Protein accession | YP_865003 |
Protein GI | 117924386 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.415771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.165061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTGGATA TGGCGGGTAT GATGCAGATT TGGCGGTTGC TCAAACAAAC CCTAGTGATT GGCGTAATTA CCCTATTGCT CACCGTGCTG GTGGGCGAAT TGGGGGTGCG TCTGTTGGTG GGGGCGCCCC TGATGGAGCG CATGCCCTTG GTCCGGGTGT TGCCAGATCC ACAAACCGGT TTTCGGATGA AACCGAGCGA TCTGCACTAT ACCTATCAGC ATAAGGTGCA GTTAAACAGC CTGGGTTTGC GTGGGCCAGA GCTGGCTGAT CCGGCTGCTG GGCGCTATCG GATATTGGCT TTGGGGGATT CGCACCTTTA CGGGCAAGGC ATTGCCGATG AGGCGTTGCT TACCACCCGC TTGCAAGAGG CGCTACAGGC GCGTTTTCCC CGCTGTCAGC CCGAGGTGGT GAATGCTGGG GTGCGAGCCT ACAGCATTAA CCAAGAATTT GCCCTATTAC AGCGGTTGCA ACCCCAGTTA CAGCCCGATC ATGTGCTGCT GTTTTTCTAC CTGAACGATT TTGATGAGGT GAACATTGCG GCCCGCTACC GACGCTATAA GGGATTGGAT TGGTATATGC CGGACCTTTC GGGAAAGCCC GAAGGGGAGC GTCTACAGCG TTGGCAACAG ATGCAAGGGT TACGGCACAG TGCACTGTTG ATGTGGTTGC ACGATCTATG GCGGGGGCTG ACGGTGGACC CTAACCATTT TGAACAAAAA ATTCTGCGCG GGGCTACGGA TAAAGAGAGT GAGCAGCGCC GCGCTATGGT GGTGAGCTAT TTGGTCCAAT TTAAACAGCT GGCTCAGCAG CAAGGATTTC GTTTTACCCT GGTCATTATT CCCGCTGCGG TGCAGATAAC CCACACCTTT ACCCCAGCGA CTTACCAAGC TTTTCTAAAG GCTCAGGCCC AGCGGCTGGG TATTGCGGTG GTGGATCTGC TGCCAGCTTT TCAAGCCGAC TATCAGCAGC GGGGCCAGCG ACCTATACTG CCCTTTGATG GTCACTATAA TGTTCGAGGC CAGCAGCTTA TGGCTCAACA GGTGATGGCC TACCTACAGG AGCAGGCCCC CCCCTGCGCA CAACCCTAA
|
Protein sequence | MVDMAGMMQI WRLLKQTLVI GVITLLLTVL VGELGVRLLV GAPLMERMPL VRVLPDPQTG FRMKPSDLHY TYQHKVQLNS LGLRGPELAD PAAGRYRILA LGDSHLYGQG IADEALLTTR LQEALQARFP RCQPEVVNAG VRAYSINQEF ALLQRLQPQL QPDHVLLFFY LNDFDEVNIA ARYRRYKGLD WYMPDLSGKP EGERLQRWQQ MQGLRHSALL MWLHDLWRGL TVDPNHFEQK ILRGATDKES EQRRAMVVSY LVQFKQLAQQ QGFRFTLVII PAAVQITHTF TPATYQAFLK AQAQRLGIAV VDLLPAFQAD YQQRGQRPIL PFDGHYNVRG QQLMAQQVMA YLQEQAPPCA QP
|
| |