| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1077 |
|---|
| Symbol | |
|---|
| ID | 4481365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1316525 |
|---|
| End bp | 1318228 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721826 |
|---|
| Product | ATPase central domain-containing protein |
|---|
| Protein accession | YP_865001 |
|---|
| Protein GI | 117924384 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0956592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC TTGAGCTCGC CCGCCCCATC GCCACCGCAC TGGTTGAAAA GCATCCAGAG
CTGCAACGCT ACCTGGAGCA GTTAAACATC TCTCATCGCA TGGTCATTGC CTATACAGAT
CTCGCGCCAG CTCACCTGCG CACCTTGATT GCCCTTTATG GGCAAGAGAG CGGCGCGGAG
GTGCGGGTGG CGCTGCTTGA GGCCCTACAA CAGGCCAGTG CTGGAGAGCG CTATCAAGCC
GAACACTTTC CACAGCTTAT CCCGGATTTG GTGGCTTATC TTTGCCAGGG CAGCCAGCGG
GGCTGGCTGT TTAAATTGGA CAACTCCGCG ACCCTACGCC CCTATCTGGT CACACGCATT
GACTTTACCC CATCGGGTGG CGATGAAAAT GCCCGTTTGG TGGTGGAGCT CAAAGCCAAC
TGTTGCGGCA AGCTTGCCCA TCCACAACTG ATCTTTAGCG AACGGGACAT CCCCGACCGC
ACCCTACCAG AGCTCTTAGC AGACCGAGGA TTTGTAAAAG AGAGCCCCCC ATTGGTTGCG
CTCTACGACC AACAGAGCCG CCAATATTTC GACTGGCGCA ACCGTTTTAA CGTACAATTT
TCCGGGCGTG GTATTGGCCT CTATGCCGAA GACCCCAGCG CCACCCACCG CAATACGGAC
TATGCGCGTA AAAATGTGGT GGTGCTCTCC ACCACCGACA GACCGGCCCG CTTGGTTAAT
GACGAATCCA TCCTCACCGA CCGGGATCTT ACCCTGGAGT CCTCTGGGGC GATATTAAGC
ACCCTACTCA AGCGTATTCA GCGCGAATCT GGCCTACCTC GTGAGATCGA CAACCGATTA
ATAACCCTGG CCGAAGAGAT GCCCCCCAGC CTCTTTACCC AGCTGCCAGT GCATGCCTAT
CTGTTTGTTT TTCATCTTGA GCTTCATCAC CATCTTTGGG TTCACATGGA TCATCTTAGC
CTTTATTGTT ACCAACCTGA ACTTAAAGAA AAGCTCATTT TACCAGTCGA GCATGTGGAT
TTAATCGACA TTCTCACCGC TGAGATGGAT CTCTTAATGG AAGATATTGT AGAGGGTAAA
TCTGGCGGCA CTACGGTGCT CTGCTCGGGT CCTGCGGGGG TGGGCAAGAC CTTGACCGCA
GAGGTCTACG CCGAGATCAT TCGACGCCCC CTTTACCGGG TGCACTCCGG TCAATTGGGG
CTCAATGTGG CAGAGATGGA AAAGAGCTTA AAAGAGGTCT TAATTCGTGC CCAACGTTGG
GGTGCGGTCA TGCTGATTGA CGAGGCCGAT GTCTACATTA AGCGGCGTGA TGATAACCTT
ACCATGAACG CCGTGGTGGG GGTTTTTCTA CGGGTATTGG AATATTTTAA TGGTCTGCTG
TTTTTAACCA CCAACCGAAG CCATGATATT GACGAGGCGA TTATCTCGCG CTGTATCGCC
ATGATCCGCT TTCAGCCCCC TTCACGTCAG GAGCGGGTAC AGATTTGGTC GGTCATGGCC
GAGCAGTTTG CCCTTCCCCT CTCGGTGCCG ATGCAGGAAC AGCTGGCGGA TTGTTATCCT
CAAGCCACCG GGCGAGACAT TAAAGGCTTA ACCAAACTGG TGGCGAAATA TTGTGCCCAT
CGCAGCACGT CACCCAGCTT GGCGGTCTTT GCCCACTGCG CCATCTTTCG GGGCATGGAT
CTACCATCGG CACCGGCCTC TTAG
|
|---|
| Protein sequence | MAKLELARPI ATALVEKHPE LQRYLEQLNI SHRMVIAYTD LAPAHLRTLI ALYGQESGAE
VRVALLEALQ QASAGERYQA EHFPQLIPDL VAYLCQGSQR GWLFKLDNSA TLRPYLVTRI
DFTPSGGDEN ARLVVELKAN CCGKLAHPQL IFSERDIPDR TLPELLADRG FVKESPPLVA
LYDQQSRQYF DWRNRFNVQF SGRGIGLYAE DPSATHRNTD YARKNVVVLS TTDRPARLVN
DESILTDRDL TLESSGAILS TLLKRIQRES GLPREIDNRL ITLAEEMPPS LFTQLPVHAY
LFVFHLELHH HLWVHMDHLS LYCYQPELKE KLILPVEHVD LIDILTAEMD LLMEDIVEGK
SGGTTVLCSG PAGVGKTLTA EVYAEIIRRP LYRVHSGQLG LNVAEMEKSL KEVLIRAQRW
GAVMLIDEAD VYIKRRDDNL TMNAVVGVFL RVLEYFNGLL FLTTNRSHDI DEAIISRCIA
MIRFQPPSRQ ERVQIWSVMA EQFALPLSVP MQEQLADCYP QATGRDIKGL TKLVAKYCAH
RSTSPSLAVF AHCAIFRGMD LPSAPAS
|
|---|
| |